Information for 3-CATCGCGCCGCDCCTT (Motif 8)

G T A C G T C A A C G T A G T C C T A G A T G C A C T G A G T C A G T C A C T G A G T C C A T G A T G C A T G C A G C T A G C T
Reverse Opposite:
C T G A C T G A A T C G A T C G G T A C A C T G G T A C C T A G C T A G A G T C A T C G A G T C A C T G G T C A A C G T A C T G
p-value:1e-11
log p-value:-2.560e+01
Information Content per bp:1.765
Number of Target Sequences with motif7.0
Percentage of Target Sequences with motif0.84%
Number of Background Sequences with motif6.0
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets49.8 +/- 25.2bp
Average Position of motif in Background52.4 +/- 24.5bp
Strand Bias (log2 ratio + to - strand density)1.0
Multiplicity (# of sites on avg that occur together)1.29
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

POL006.1_BREu/Jaspar

Match Rank:1
Score:0.60
Offset:1
Orientation:forward strand
Alignment:CATCGCGCCGCDCCTT
-AGCGCGCC-------
 G T A C G T C A A C G T A G T C C T A G A T G C A C T G A G T C A G T C A C T G A G T C C A T G A T G C A T G C A G C T A G C T
A C G T T G C A T A C G T A G C T C A G T G A C A C T G A G T C A G T C A C G T A C G T A C G T A C G T A C G T A C G T A C G T

PB0199.1_Zfp161_2/Jaspar

Match Rank:2
Score:0.52
Offset:1
Orientation:forward strand
Alignment:CATCGCGCCGCDCCTT
-GCCGCGCAGTGCGT-
 G T A C G T C A A C G T A G T C C T A G A T G C A C T G A G T C A G T C A C T G A G T C C A T G A T G C A T G C A G C T A G C T
A C G T C A T G G A T C A G T C T A C G G A T C C T A G T G A C G T C A C T A G A C G T C T A G G T A C T C A G A G C T A C G T

KLF5(Zf)/LoVo-KLF5-ChIP-Seq(GSE49402)/Homer

Match Rank:3
Score:0.51
Offset:6
Orientation:reverse strand
Alignment:CATCGCGCCGCDCCTT
------GCCMCRCCCH
 G T A C G T C A A C G T A G T C C T A G A T G C A C T G A G T C A G T C A C T G A G T C C A T G A T G C A T G C A G C T A G C T
A C G T A C G T A C G T A C G T A C G T A C G T C T A G G T A C G A T C G T C A G A T C C T G A A G T C A G T C A G T C G C A T

PB0164.1_Smad3_2/Jaspar

Match Rank:4
Score:0.50
Offset:-2
Orientation:forward strand
Alignment:--CATCGCGCCGCDCCTT
TACGCCCCGCCACTCTG-
 A C G T A C G T G T A C G T C A A C G T A G T C C T A G A T G C A C T G A G T C A G T C A C T G A G T C C A T G A T G C A T G C A G C T A G C T
C A G T G T C A G T A C A C T G G A T C A G T C T A G C A T G C T A C G A G T C G T A C G T C A G T A C G A C T A G T C G A C T A C T G A C G T

PB0180.1_Sp4_2/Jaspar

Match Rank:5
Score:0.50
Offset:3
Orientation:reverse strand
Alignment:CATCGCGCCGCDCCTT--
---NNGGCCACGCCTTTN
 G T A C G T C A A C G T A G T C C T A G A T G C A C T G A G T C A G T C A C T G A G T C C A T G A T G C A T G C A G C T A G C T A C G T A C G T
A C G T A C G T A C G T G T A C C A G T C T A G C T A G T G A C G A T C T G C A T G A C A C T G T G A C T A G C A G C T G C A T G C A T T C A G

KLF5/MA0599.1/Jaspar

Match Rank:6
Score:0.49
Offset:6
Orientation:forward strand
Alignment:CATCGCGCCGCDCCTT
------GCCCCGCCCC
 G T A C G T C A A C G T A G T C C T A G A T G C A C T G A G T C A G T C A C T G A G T C C A T G A T G C A T G C A G C T A G C T
A C G T A C G T A C G T A C G T A C G T A C G T A C T G A G T C A G T C G T A C A G T C C T A G A G T C A G T C A G T C G A T C

E2F4/MA0470.1/Jaspar

Match Rank:7
Score:0.49
Offset:-1
Orientation:reverse strand
Alignment:-CATCGCGCCGCDCCTT
NNTTCCCGCCC------
 A C G T G T A C G T C A A C G T A G T C C T A G A T G C A C T G A G T C A G T C A C T G A G T C C A T G A T G C A T G C A G C T A G C T
A G T C A G T C A G C T A G C T A T G C A T G C A G T C A C T G A T G C A T G C T G A C A C G T A C G T A C G T A C G T A C G T A C G T

Zic(Zf)/Cerebellum-ZIC1.2-ChIP-Seq(GSE60731)/Homer

Match Rank:8
Score:0.49
Offset:-3
Orientation:reverse strand
Alignment:---CATCGCGCCGCDCCTT
DCTCAGCAGG---------
 A C G T A C G T A C G T G T A C G T C A A C G T A G T C C T A G A T G C A C T G A G T C A G T C A C T G A G T C C A T G A T G C A T G C A G C T A G C T
C A G T G T A C G C A T A G T C G C T A A C T G A G T C C T G A A C T G A C T G A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

Klf4/MA0039.2/Jaspar

Match Rank:9
Score:0.49
Offset:6
Orientation:reverse strand
Alignment:CATCGCGCCGCDCCTT
------GCCCCACCCA
 G T A C G T C A A C G T A G T C C T A G A T G C A C T G A G T C A G T C A C T G A G T C C A T G A T G C A T G C A G C T A G C T
A C G T A C G T A C G T A C G T A C G T A C G T T C A G T G A C G A T C T G A C G T A C C T G A T A G C A G T C A G T C G C T A

PB0202.1_Zfp410_2/Jaspar

Match Rank:10
Score:0.48
Offset:2
Orientation:forward strand
Alignment:CATCGCGCCGCDCCTT---
--TCACCCCGCCCCAAATT
 G T A C G T C A A C G T A G T C C T A G A T G C A C T G A G T C A G T C A C T G A G T C C A T G A T G C A T G C A G C T A G C T A C G T A C G T A C G T
A C G T A C G T A G C T G A T C G T C A A G T C G A T C A G T C A G T C A C T G T G A C A G T C T G A C A T G C C G A T G C T A G T C A G A C T G C A T