Information for 5-TAAGCAAACA (Motif 2)

C A G T G C T A C T G A A T C G G A T C G T C A T C G A C G T A G A T C G T C A
Reverse Opposite:
C A G T C T A G A C G T A G C T C A G T C T A G T A G C G A C T C G A T G T C A
p-value:1e-19
log p-value:-4.597e+01
Information Content per bp:1.561
Number of Target Sequences with motif90.0
Percentage of Target Sequences with motif10.77%
Number of Background Sequences with motif1640.8
Percentage of Background Sequences with motif3.48%
Average Position of motif in Targets47.3 +/- 27.9bp
Average Position of motif in Background49.4 +/- 30.9bp
Strand Bias (log2 ratio + to - strand density)0.2
Multiplicity (# of sites on avg that occur together)1.05
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

FOXM1(Forkhead)/MCF7-FOXM1-ChIP-Seq(GSE72977)/Homer

Match Rank:1
Score:0.87
Offset:0
Orientation:reverse strand
Alignment:TAAGCAAACA
WAAGTAAAYA
C A G T G C T A C T G A A T C G G A T C G T C A T C G A C G T A G A T C G T C A
G C A T T C G A C T G A T C A G A G C T G T C A G T C A C T G A A G T C T G C A

FOXA1(Forkhead)/LNCAP-FOXA1-ChIP-Seq(GSE27824)/Homer

Match Rank:2
Score:0.83
Offset:0
Orientation:forward strand
Alignment:TAAGCAAACA
AAAGTAAACA
C A G T G C T A C T G A A T C G G A T C G T C A T C G A C G T A G A T C G T C A
G C T A T C G A C G T A C T A G A G C T G T C A G T C A C G T A A G T C C G T A

FOXA1(Forkhead)/MCF7-FOXA1-ChIP-Seq(GSE26831)/Homer

Match Rank:3
Score:0.82
Offset:0
Orientation:forward strand
Alignment:TAAGCAAACA
AAAGTAAACA
C A G T G C T A C T G A A T C G G A T C G T C A T C G A C G T A G A T C G T C A
G C T A T C G A C G T A C T A G A G C T G T C A G T C A C G T A A G T C C G T A

FOXA1/MA0148.3/Jaspar

Match Rank:4
Score:0.80
Offset:-1
Orientation:reverse strand
Alignment:-TAAGCAAACA----
CAAAGTAAACANNNN
A C G T C A G T G C T A C T G A A T C G G A T C G T C A T C G A C G T A G A T C G T C A A C G T A C G T A C G T A C G T
G T A C G C T A T C G A C G T A C T A G A G C T G T C A G T C A C G T A A G T C G C T A C G A T T A C G T C A G C T G A

FOXC2/MA0846.1/Jaspar

Match Rank:5
Score:0.80
Offset:0
Orientation:forward strand
Alignment:TAAGCAAACA--
TAAGTAAACAAA
C A G T G C T A C T G A A T C G G A T C G T C A T C G A C G T A G A T C G T C A A C G T A C G T
G C A T C T G A G C T A T C A G G A C T G T C A G T C A C T G A A G T C C T G A G C T A G C T A

Fox:Ebox(Forkhead,bHLH)/Panc1-Foxa2-ChIP-Seq(GSE47459)/Homer

Match Rank:6
Score:0.79
Offset:-5
Orientation:forward strand
Alignment:-----TAAGCAAACA--
NNNVCTGWGYAAACASN
A C G T A C G T A C G T A C G T A C G T C A G T G C T A C T G A A T C G G A T C G T C A T C G A C G T A G A T C G T C A A C G T A C G T
A T G C C T G A A T C G T A C G A G T C C G A T T C A G C G A T C T A G A G C T G T C A G T C A C G T A A G T C C G T A T A C G C T G A

Foxa2/MA0047.2/Jaspar

Match Rank:7
Score:0.79
Offset:-2
Orientation:reverse strand
Alignment:--TAAGCAAACA
NCTAAGTAAACA
A C G T A C G T C A G T G C T A C T G A A T C G G A T C G T C A T C G A C G T A G A T C G T C A
T A G C G T A C G C A T T C G A C G T A C T A G A G C T G T C A T G C A C G T A A G T C C G T A

Foxa2(Forkhead)/Liver-Foxa2-ChIP-Seq(GSE25694)/Homer

Match Rank:8
Score:0.78
Offset:0
Orientation:reverse strand
Alignment:TAAGCAAACA--
TATGTAAACANG
C A G T G C T A C T G A A T C G G A T C G T C A T C G A C G T A G A T C G T C A A C G T A C G T
G C A T T C G A C G A T C T A G A G C T G T C A G T C A C G T A A G T C C G T A C T G A T A C G

MF0005.1_Forkhead_class/Jaspar

Match Rank:9
Score:0.78
Offset:1
Orientation:reverse strand
Alignment:TAAGCAAACA
-AAATAAACA
C A G T G C T A C T G A A T C G G A T C G T C A T C G A C G T A G A T C G T C A
A C G T T C G A G T C A T C G A G A C T G T C A C T G A T C G A G A T C C G T A

Foxa3(Forkhead)/Liver-Foxa3-ChIP-Seq(GSE77670)/Homer

Match Rank:10
Score:0.78
Offset:-2
Orientation:reverse strand
Alignment:--TAAGCAAACA---
NCWRWGTAAACANSV
A C G T A C G T C A G T G C T A C T G A A T C G G A T C G T C A T C G A C G T A G A T C G T C A A C G T A C G T A C G T
T G A C G A T C G C A T C T G A C G A T C T A G A G C T G T C A G T C A C G T A A G T C C G T A C G T A A T C G T C A G