Information for 15-CTCTCTTTCTTCG (Motif 19)

A G T C A C G T A G T C A C G T A G T C A C G T A C G T A C G T A G T C A C G T A C G T A G T C A C T G
Reverse Opposite:
T A G C C T A G C G T A C G T A A C T G C G T A C G T A C G T A A C T G C G T A A C T G C G T A A C T G
p-value:1e-8
log p-value:-1.933e+01
Information Content per bp:1.928
Number of Target Sequences with motif4.0
Percentage of Target Sequences with motif0.48%
Number of Background Sequences with motif1.2
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets70.0 +/- 26.9bp
Average Position of motif in Background26.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)0.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Sox4(HMG)/proB-Sox4-ChIP-Seq(GSE50066)/Homer

Match Rank:1
Score:0.62
Offset:3
Orientation:forward strand
Alignment:CTCTCTTTCTTCG
---YCTTTGTTCC
 A G T C A C G T A G T C A C G T A G T C A C G T A C G T A C G T A G T C A C G T A C G T A G T C A C T G
A C G T A C G T A C G T A G T C A G T C C G A T A C G T A C G T A C T G A C G T A G C T A G T C A G T C

PB0192.1_Tcfap2e_2/Jaspar

Match Rank:2
Score:0.59
Offset:3
Orientation:reverse strand
Alignment:CTCTCTTTCTTCG----
---TTTTTTTTCNNGTN
 A G T C A C G T A G T C A C G T A G T C A C G T A C G T A C G T A G T C A C G T A C G T A G T C A C T G A C G T A C G T A C G T A C G T
A C G T A C G T A C G T G A C T G C A T C A G T C G A T A G C T A G C T G C A T G C A T A G T C T G A C G T C A A C T G G A C T C G T A

PB0071.1_Sox4_1/Jaspar

Match Rank:3
Score:0.58
Offset:-1
Orientation:reverse strand
Alignment:-CTCTCTTTCTTCG---
TNNTCCTTTGTTCTNNT
 A C G T A G T C A C G T A G T C A C G T A G T C A C G T A C G T A C G T A G T C A C G T A C G T A G T C A C T G A C G T A C G T A C G T
C G A T C G T A T C A G A G C T A G T C A G T C C G A T A C G T C G A T T A C G C G A T A G C T G A T C G C A T G A C T T G A C C A G T

PB0061.1_Sox11_1/Jaspar

Match Rank:4
Score:0.57
Offset:-1
Orientation:reverse strand
Alignment:-CTCTCTTTCTTCG---
NNNTCCTTTGTTCTNNN
 A C G T A G T C A C G T A G T C A C G T A G T C A C G T A C G T A C G T A G T C A C G T A C G T A G T C A C T G A C G T A C G T A C G T
C G A T C G T A T C A G A G C T A G T C G A T C C G A T A C G T C G A T A C T G C G A T A G C T G A T C G C A T G C A T T G C A C G A T

Sox3/MA0514.1/Jaspar

Match Rank:5
Score:0.57
Offset:3
Orientation:forward strand
Alignment:CTCTCTTTCTTCG
---CCTTTGTTTT
 A G T C A C G T A G T C A C G T A G T C A C G T A C G T A C G T A G T C A C G T A C G T A G T C A C T G
A C G T A C G T A C G T A T G C A G T C C G A T A C G T A C G T A T C G A C G T A G C T A G C T A G C T

PB0148.1_Mtf1_2/Jaspar

Match Rank:6
Score:0.56
Offset:1
Orientation:reverse strand
Alignment:CTCTCTTTCTTCG--
-NNTTTTTCTTATNT
 A G T C A C G T A G T C A C G T A G T C A C G T A C G T A C G T A G T C A C G T A C G T A G T C A C T G A C G T A C G T
A C G T A C T G G C A T A C G T C G A T C G A T C G A T C A G T G T A C C G A T C G A T G T C A C G A T G C A T C A G T

IRF1(IRF)/PBMC-IRF1-ChIP-Seq(GSE43036)/Homer

Match Rank:7
Score:0.55
Offset:-3
Orientation:reverse strand
Alignment:---CTCTCTTTCTTCG
ACTTTCACTTTC----
 A C G T A C G T A C G T A G T C A C G T A G T C A C G T A G T C A C G T A C G T A C G T A G T C A C G T A C G T A G T C A C T G
C T G A A T G C G A C T C G A T A G C T A G T C C G T A A T G C A C G T A C G T G A C T A G T C A C G T A C G T A C G T A C G T

ISRE(IRF)/ThioMac-LPS-Expression(GSE23622)/Homer

Match Rank:8
Score:0.55
Offset:-3
Orientation:forward strand
Alignment:---CTCTCTTTCTTCG
AGTTTCAGTTTC----
 A C G T A C G T A C G T A G T C A C G T A G T C A C G T A G T C A C G T A C G T A C G T A G T C A C G T A C G T A G T C A C T G
C T G A A T C G A G C T A G C T A C G T T A G C C T G A T A C G C G A T A C G T G A C T A G T C A C G T A C G T A C G T A C G T

Sox10(HMG)/SciaticNerve-Sox3-ChIP-Seq(GSE35132)/Homer

Match Rank:9
Score:0.55
Offset:3
Orientation:forward strand
Alignment:CTCTCTTTCTTCG
---CCWTTGTYYB
 A G T C A C G T A G T C A C G T A G T C A C G T A C G T A C G T A G T C A C G T A C G T A G T C A C T G
A C G T A C G T A C G T A T G C A G T C G C A T A G C T A C G T T C A G C G A T A G C T G A T C A T C G

EWSR1-FLI1/MA0149.1/Jaspar

Match Rank:10
Score:0.54
Offset:-5
Orientation:reverse strand
Alignment:-----CTCTCTTTCTTCG
CCTTCCTTCCTTCCTTCC
 A C G T A C G T A C G T A C G T A C G T A G T C A C G T A G T C A C G T A G T C A C G T A C G T A C G T A G T C A C G T A C G T A G T C A C T G
A G T C G A T C G A C T C A G T A T G C A G T C A C G T A C G T A T G C G T A C A G C T A G C T G A T C A G T C A G C T A G C T A G T C A G T C