Information for 13-TACAAAGGAAAGA (Motif 18)

G A C T C T G A A G T C C G T A T G C A C T G A C T A G A C T G C G T A C G T A C T G A A T C G C G T A
Reverse Opposite:
A C G T A T G C A G C T C G A T A C G T A G T C A G T C A G C T A C G T C G A T A C T G A G C T C G T A
p-value:1e-8
log p-value:-1.972e+01
Information Content per bp:1.790
Number of Target Sequences with motif10.0
Percentage of Target Sequences with motif1.20%
Number of Background Sequences with motif38.2
Percentage of Background Sequences with motif0.08%
Average Position of motif in Targets43.1 +/- 24.6bp
Average Position of motif in Background50.0 +/- 29.2bp
Strand Bias (log2 ratio + to - strand density)0.6
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Sox2/MA0143.3/Jaspar

Match Rank:1
Score:0.70
Offset:0
Orientation:reverse strand
Alignment:TACAAAGGAAAGA
AACAAAGG-----
 G A C T C T G A A G T C C G T A T G C A C T G A C T A G A C T G C G T A C G T A C T G A A T C G C G T A
T C G A C G T A A G T C C G T A C G T A C G T A A C T G A C T G A C G T A C G T A C G T A C G T A C G T

Sox3/MA0514.1/Jaspar

Match Rank:2
Score:0.68
Offset:-2
Orientation:reverse strand
Alignment:--TACAAAGGAAAGA
AAAACAAAGG-----
 A C G T A C G T G A C T C T G A A G T C C G T A T G C A C T G A C T A G A C T G C G T A C G T A C T G A A T C G C G T A
T C G A T C G A T C G A C G T A A T G C C G T A C G T A C G T A C T A G T A C G A C G T A C G T A C G T A C G T A C G T

Sox3(HMG)/NPC-Sox3-ChIP-Seq(GSE33059)/Homer

Match Rank:3
Score:0.68
Offset:0
Orientation:reverse strand
Alignment:TACAAAGGAAAGA
RACAAWGG-----
 G A C T C T G A A G T C C G T A T G C A C T G A C T A G A C T G C G T A C G T A C T G A A T C G C G T A
T C G A G T C A T G A C C G T A C G T A C G T A C T A G T A C G A C G T A C G T A C G T A C G T A C G T

Sox10(HMG)/SciaticNerve-Sox3-ChIP-Seq(GSE35132)/Homer

Match Rank:4
Score:0.65
Offset:-2
Orientation:reverse strand
Alignment:--TACAAAGGAAAGA
VRRACAAWGG-----
 A C G T A C G T G A C T C T G A A G T C C G T A T G C A C T G A C T A G A C T G C G T A C G T A C T G A A T C G C G T A
T A G C C T A G T C G A C G T A A G T C C G T A C T G A C G T A C T A G T A C G A C G T A C G T A C G T A C G T A C G T

SOX10/MA0442.1/Jaspar

Match Rank:5
Score:0.65
Offset:1
Orientation:reverse strand
Alignment:TACAAAGGAAAGA
-ACAAAG------
 G A C T C T G A A G T C C G T A T G C A C T G A C T A G A C T G C G T A C G T A C T G A A T C G C G T A
A C G T G T C A A T G C C G T A T G C A C G T A C T A G A C G T A C G T A C G T A C G T A C G T A C G T

PB0166.1_Sox12_2/Jaspar

Match Rank:6
Score:0.65
Offset:-5
Orientation:forward strand
Alignment:-----TACAAAGGAAAGA
AAACAGACAAAGGAAT--
 A C G T A C G T A C G T A C G T A C G T G A C T C T G A A G T C C G T A T G C A C T G A C T A G A C T G C G T A C G T A C T G A A T C G C G T A
T G C A T G C A C G T A A G C T C T G A A T C G C G T A A G T C G C T A T C G A G C T A T A C G T C A G T G C A C G T A G A C T A C G T A C G T

Sox4(HMG)/proB-Sox4-ChIP-Seq(GSE50066)/Homer

Match Rank:7
Score:0.64
Offset:-2
Orientation:reverse strand
Alignment:--TACAAAGGAAAGA
GGAACAAAGR-----
 A C G T A C G T G A C T C T G A A G T C C G T A T G C A C T G A C T A G A C T G C G T A C G T A C T G A A T C G C G T A
T C A G T C A G T C G A C G T A A G T C C G T A C G T A C G T A A C T G T C A G A C G T A C G T A C G T A C G T A C G T

PB0061.1_Sox11_1/Jaspar

Match Rank:8
Score:0.63
Offset:-5
Orientation:forward strand
Alignment:-----TACAAAGGAAAGA
ATAAGAACAAAGGACTA-
 A C G T A C G T A C G T A C G T A C G T G A C T C T G A A G T C C G T A T G C A C T G A C T A G A C T G C G T A C G T A C T G A A T C G C G T A
G C T A A C G T C G T A C G T A C T A G T C G A C G T A A G T C C G T A G T C A C G T A C T A G T C A G T C G A A G T C G C A T G C T A A C G T

PB0071.1_Sox4_1/Jaspar

Match Rank:9
Score:0.63
Offset:-5
Orientation:forward strand
Alignment:-----TACAAAGGAAAGA
AGAAGAACAAAGGACTA-
 A C G T A C G T A C G T A C G T A C G T G A C T C T G A A G T C C G T A T G C A C T G A C T A G A C T G C G T A C G T A C T G A A T C G C G T A
G T C A A C T G C T G A C G T A C T A G T C G A C G T A A G T C C G T A C G T A C G T A C T A G T C A G T C G A A G T C G C A T G C T A A C G T

Sox2(HMG)/mES-Sox2-ChIP-Seq(GSE11431)/Homer

Match Rank:10
Score:0.61
Offset:-1
Orientation:reverse strand
Alignment:-TACAAAGGAAAGA
GAACAATGGN----
 A C G T G A C T C T G A A G T C C G T A T G C A C T G A C T A G A C T G C G T A C G T A C T G A A T C G C G T A
C T A G T C G A C G T A A G T C C G T A C G T A C G A T C T A G T C A G T A C G A C G T A C G T A C G T A C G T