Information for 12-YTTRGAAAGWRCA (Motif 17)

A G T C A C G T A C G T C T G A A C T G C G T A C G T A C G T A A C T G C G T A C T G A A G T C C G T A
Reverse Opposite:
A C G T A C T G A G C T C G A T A G T C A C G T A C G T A C G T A G T C G A C T C G T A C G T A C T A G
p-value:1e-9
log p-value:-2.153e+01
Information Content per bp:1.879
Number of Target Sequences with motif5.0
Percentage of Target Sequences with motif0.60%
Number of Background Sequences with motif2.8
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets45.3 +/- 30.0bp
Average Position of motif in Background54.7 +/- 29.5bp
Strand Bias (log2 ratio + to - strand density)-2.3
Multiplicity (# of sites on avg that occur together)1.20
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0134.1_Hnf4a_2/Jaspar

Match Rank:1
Score:0.62
Offset:1
Orientation:forward strand
Alignment:YTTRGAAAGWRCA----
-GGCAAAAGTCCAATAA
 A G T C A C G T A C G T C T G A A C T G C G T A C G T A C G T A A C T G C G T A C T G A A G T C C G T A A C G T A C G T A C G T A C G T
A C G T A C G T A C G T G A T C G T A C C G T A C T G A C T G A A C T G A C G T G T A C A G T C C T G A G T C A C G A T G T C A G C A T

NFATC1/MA0624.1/Jaspar

Match Rank:2
Score:0.60
Offset:0
Orientation:reverse strand
Alignment:YTTRGAAAGWRCA
NNTGGAAANN---
 A G T C A C G T A C G T C T G A A C T G C G T A C G T A C G T A A C T G C G T A C T G A A G T C C G T A
C G T A C T G A G A C T C T A G A C T G C T G A C T G A G C T A C G T A G C A T A C G T A C G T A C G T

NFAT5/MA0606.1/Jaspar

Match Rank:3
Score:0.59
Offset:0
Orientation:reverse strand
Alignment:YTTRGAAAGWRCA
NATGGAAAAN---
 A G T C A C G T A C G T C T G A A C T G C G T A C G T A C G T A A C T G C G T A C T G A A G T C C G T A
G C T A C T G A C G A T T C A G C T A G C G T A C G T A C G T A C G T A A C G T A C G T A C G T A C G T

NFATC3/MA0625.1/Jaspar

Match Rank:4
Score:0.59
Offset:0
Orientation:reverse strand
Alignment:YTTRGAAAGWRCA
AATGGAAAAT---
 A G T C A C G T A C G T C T G A A C T G C G T A C G T A C G T A A C T G C G T A C T G A A G T C C G T A
C G T A C T G A G A C T T A C G C A T G T C G A C G T A G C T A C T G A G C A T A C G T A C G T A C G T

NFAT(RHD)/Jurkat-NFATC1-ChIP-Seq(Jolma_et_al.)/Homer

Match Rank:5
Score:0.58
Offset:0
Orientation:reverse strand
Alignment:YTTRGAAAGWRCA
AATGGAAAAT---
 A G T C A C G T A C G T C T G A A C T G C G T A C G T A C G T A A C T G C G T A C T G A A G T C C G T A
T C G A T C G A A G C T A C T G A C T G C G T A C G T A G T C A T G C A G C A T A C G T A C G T A C G T

Bcl6/MA0463.1/Jaspar

Match Rank:6
Score:0.57
Offset:-3
Orientation:forward strand
Alignment:---YTTRGAAAGWRCA
TTTCCTAGAAAGCA--
 A C G T A C G T A C G T A G T C A C G T A C G T C T G A A C T G C G T A C G T A C G T A A C T G C G T A C T G A A G T C C G T A
C A G T C G A T A G C T G T A C A G T C A C G T T C G A C T A G C T G A T C G A C T G A C A T G G T A C G C T A A C G T A C G T

PB0006.1_Bcl6b_1/Jaspar

Match Rank:7
Score:0.57
Offset:-6
Orientation:reverse strand
Alignment:------YTTRGAAAGWRCA
NNNATTCCTCGAAAGN---
 A C G T A C G T A C G T A C G T A C G T A C G T A G T C A C G T A C G T C T G A A C T G C G T A C G T A C G T A A C T G C G T A C T G A A G T C C G T A
A T G C C T G A C G T A C G T A C G A T G C A T G T A C A G T C G C A T T G A C C T A G G C T A C G T A C T G A C T A G G C T A A C G T A C G T A C G T

NFATC2/MA0152.1/Jaspar

Match Rank:8
Score:0.57
Offset:2
Orientation:reverse strand
Alignment:YTTRGAAAGWRCA
--TGGAAAA----
 A G T C A C G T A C G T C T G A A C T G C G T A C G T A C G T A A C T G C G T A C T G A A G T C C G T A
A C G T A C G T C G A T A C T G A C T G C G T A C G T A T C G A G C T A A C G T A C G T A C G T A C G T

Nur77(NR)/K562-NR4A1-ChIP-Seq(GSE31363)/Homer

Match Rank:9
Score:0.57
Offset:1
Orientation:reverse strand
Alignment:YTTRGAAAGWRCA
-ANGNAAAGGTCA
 A G T C A C G T A C G T C T G A A C T G C G T A C G T A C G T A A C T G C G T A C T G A A G T C C G T A
A C G T C T G A A C T G C A T G C A G T C G T A C G T A C G T A A C T G A C T G A C G T A G T C C G T A

IRF1(IRF)/PBMC-IRF1-ChIP-Seq(GSE43036)/Homer

Match Rank:10
Score:0.56
Offset:4
Orientation:forward strand
Alignment:YTTRGAAAGWRCA---
----GAAAGTGAAAGT
 A G T C A C G T A C G T C T G A A C T G C G T A C G T A C G T A A C T G C G T A C T G A A G T C C G T A A C G T A C G T A C G T
A C G T A C G T A C G T A C G T T C A G C T G A C G T A C G T A T A C G G C A T C T A G C T G A C G T A C G T A T A C G G A C T