Information for 6-CTGACAAATCCGC (Motif 10)

A G T C A G C T A C T G C T G A A G T C C G T A C G T A C G T A A C G T A G T C A G T C A T C G A G T C
Reverse Opposite:
A C T G A T G C A C T G A C T G C G T A A C G T A C G T A C G T A C T G A G C T A G T C C T G A A C T G
p-value:1e-10
log p-value:-2.498e+01
Information Content per bp:1.936
Number of Target Sequences with motif5.0
Percentage of Target Sequences with motif0.60%
Number of Background Sequences with motif1.4
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets30.2 +/- 18.3bp
Average Position of motif in Background38.7 +/- 18.8bp
Strand Bias (log2 ratio + to - strand density)0.6
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Tgif1(Homeobox)/mES-Tgif1-ChIP-Seq(GSE55404)/Homer

Match Rank:1
Score:0.62
Offset:-1
Orientation:reverse strand
Alignment:-CTGACAAATCCGC
RHTGWCAR------
 A C G T A G T C A G C T A C T G C T G A A G T C C G T A C G T A C G T A A C G T A G T C A G T C A T C G A G T C
C T A G G T A C A G C T C T A G G C T A G A T C C G T A C T G A A C G T A C G T A C G T A C G T A C G T A C G T

PH0015.1_Crx/Jaspar

Match Rank:2
Score:0.61
Offset:1
Orientation:reverse strand
Alignment:CTGACAAATCCGC----
-AGGCTAATCCCCAANG
 A G T C A G C T A C T G C T G A A G T C C G T A C G T A C G T A A C G T A G T C A G T C A T C G A G T C A C G T A C G T A C G T A C G T
A C G T G T C A T A C G T C A G G A T C C G A T C G T A C G T A A C G T A G T C A G T C A T G C A T G C G C T A G C T A T G A C T C A G

Foxh1(Forkhead)/hESC-FOXH1-ChIP-Seq(GSE29422)/Homer

Match Rank:3
Score:0.60
Offset:4
Orientation:reverse strand
Alignment:CTGACAAATCCGC---
----SSAATCCACANN
 A G T C A G C T A C T G C T G A A G T C C G T A C G T A C G T A A C G T A G T C A G T C A T C G A G T C A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A T G C T A G C C T G A C G T A A C G T G T A C G T A C C T G A A G T C C G T A C T G A G T A C

Tgif2(Homeobox)/mES-Tgif2-ChIP-Seq(GSE55404)/Homer

Match Rank:4
Score:0.59
Offset:1
Orientation:forward strand
Alignment:CTGACAAATCCGC
-TGTCANYT----
 A G T C A G C T A C T G C T G A A G T C C G T A C G T A C G T A A C G T A G T C A G T C A T C G A G T C
A C G T A G C T C A T G G C A T G A T C T G C A C T A G G A T C A C G T A C G T A C G T A C G T A C G T

MEIS2/MA0774.1/Jaspar

Match Rank:5
Score:0.59
Offset:-1
Orientation:reverse strand
Alignment:-CTGACAAATCCGC
GCTGTCAA------
 A C G T A G T C A G C T A C T G C T G A A G T C C G T A C G T A C G T A A C G T A G T C A G T C A T C G A G T C
A T C G A T G C A C G T C A T G G C A T A G T C G T C A G C T A A C G T A C G T A C G T A C G T A C G T A C G T

MEIS1/MA0498.2/Jaspar

Match Rank:6
Score:0.59
Offset:0
Orientation:forward strand
Alignment:CTGACAAATCCGC
TTGACAG------
 A G T C A G C T A C T G C T G A A G T C C G T A C G T A C G T A A C G T A G T C A G T C A T C G A G T C
G C A T G C A T A T C G T G C A A G T C C T G A C T A G A C G T A C G T A C G T A C G T A C G T A C G T

Crx/MA0467.1/Jaspar

Match Rank:7
Score:0.58
Offset:4
Orientation:reverse strand
Alignment:CTGACAAATCCGC--
----CTAATCCTCTT
 A G T C A G C T A C T G C T G A A G T C C G T A C G T A C G T A A C G T A G T C A G T C A T C G A G T C A C G T A C G T
A C G T A C G T A C G T A C G T G A T C C G A T C T G A C G T A A C G T A G T C G A T C A G C T G A T C G A C T A G C T

GSC2/MA0891.1/Jaspar

Match Rank:8
Score:0.58
Offset:3
Orientation:forward strand
Alignment:CTGACAAATCCGC
---CCTAATCCGC
 A G T C A G C T A C T G C T G A A G T C C G T A C G T A C G T A A C G T A G T C A G T C A T C G A G T C
A C G T A C G T A C G T T G A C G A T C C G A T G C T A G C T A A C G T G T A C A G T C A T C G G A T C

NFYA/MA0060.2/Jaspar

Match Rank:9
Score:0.57
Offset:0
Orientation:reverse strand
Alignment:CTGACAAATCCGC-----
TGGACCAATCAGCACTCT
 A G T C A G C T A C T G C T G A A G T C C G T A C G T A C G T A A C G T A G T C A G T C A T C G A G T C A C G T A C G T A C G T A C G T A C G T
A G C T A T C G T C A G C T G A A T G C A G T C C G T A T C G A G A C T T A G C T C G A T C A G T G A C C T G A A T G C A C G T G T A C C G A T

GSC/MA0648.1/Jaspar

Match Rank:10
Score:0.57
Offset:3
Orientation:forward strand
Alignment:CTGACAAATCCGC
---GCTAATCCCC
 A G T C A G C T A C T G C T G A A G T C C G T A C G T A C G T A A C G T A G T C A G T C A T C G A G T C
A C G T A C G T A C G T T A C G G A T C A G C T C T G A C G T A A C G T A G T C A G T C A T G C G A T C