Information for 7-GAGCTCTGCCAAGGTG (Motif 8)

T C A G G T C A C A T G T A G C A C G T A G T C C G A T A T C G A T G C A G T C G T C A C T G A C T A G C A T G C G A T C A T G
Reverse Opposite:
G A T C G C T A G T A C G A T C G A C T C A G T C T A G A T C G A T G C C G T A C T A G C G T A A T C G G T A C A C G T A G T C
p-value:1e-12
log p-value:-2.929e+01
Information Content per bp:1.692
Number of Target Sequences with motif15.0
Percentage of Target Sequences with motif1.81%
Number of Background Sequences with motif56.3
Percentage of Background Sequences with motif0.12%
Average Position of motif in Targets42.8 +/- 27.0bp
Average Position of motif in Background49.3 +/- 25.6bp
Strand Bias (log2 ratio + to - strand density)0.6
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

NFIC/MA0161.1/Jaspar

Match Rank:1
Score:0.58
Offset:6
Orientation:reverse strand
Alignment:GAGCTCTGCCAAGGTG
------TGCCAA----
 T C A G G T C A C A T G T A G C A C G T A G T C C G A T A T C G A T G C A G T C G T C A C T G A C T A G C A T G C G A T C A T G
A C G T A C G T A C G T A C G T A C G T A C G T G C A T C A T G G A T C A G T C G T C A C T G A A C G T A C G T A C G T A C G T

NF1-halfsite(CTF)/LNCaP-NF1-ChIP-Seq(Unpublished)/Homer

Match Rank:2
Score:0.58
Offset:5
Orientation:forward strand
Alignment:GAGCTCTGCCAAGGTG
-----TTGCCAAG---
 T C A G G T C A C A T G T A G C A C G T A G T C C G A T A T C G A T G C A G T C G T C A C T G A C T A G C A T G C G A T C A T G
A C G T A C G T A C G T A C G T A C G T A G C T A C G T A C T G A T G C A G T C C G T A C T G A T A C G A C G T A C G T A C G T

NFIX/MA0671.1/Jaspar

Match Rank:3
Score:0.57
Offset:4
Orientation:forward strand
Alignment:GAGCTCTGCCAAGGTG
----CGTGCCAAG---
 T C A G G T C A C A T G T A G C A C G T A G T C C G A T A T C G A T G C A G T C G T C A C T G A C T A G C A T G C G A T C A T G
A C G T A C G T A C G T A C G T T A G C C A T G G C A T A C T G A T G C A G T C T G C A C T G A T A C G A C G T A C G T A C G T

NFIA/MA0670.1/Jaspar

Match Rank:4
Score:0.56
Offset:4
Orientation:forward strand
Alignment:GAGCTCTGCCAAGGTG
----GGTGCCAAGT--
 T C A G G T C A C A T G T A G C A C G T A G T C C G A T A T C G A T G C A G T C G T C A C T G A C T A G C A T G C G A T C A T G
A C G T A C G T A C G T A C G T T C A G C A T G A C G T A C T G A G T C A G T C C G T A C G T A T C A G C G A T A C G T A C G T

Sp5(Zf)/mES-Sp5.Flag-ChIP-Seq(GSE72989)/Homer

Match Rank:5
Score:0.54
Offset:2
Orientation:reverse strand
Alignment:GAGCTCTGCCAAGGTG
--GCTCCGCCCMCY--
 T C A G G T C A C A T G T A G C A C G T A G T C C G A T A T C G A T G C A G T C G T C A C T G A C T A G C A T G C G A T C A T G
A C G T A C G T C T A G A G T C G A C T G T A C A T G C C T A G A G T C A G T C A G T C G T C A A G T C G A C T A C G T A C G T

Gfi1b(Zf)/HPC7-Gfi1b-ChIP-Seq(GSE22178)/Homer

Match Rank:6
Score:0.54
Offset:-1
Orientation:forward strand
Alignment:-GAGCTCTGCCAAGGTG
AAATCACTGC-------
 A C G T T C A G G T C A C A T G T A G C A C G T A G T C C G A T A T C G A T G C A G T C G T C A C T G A C T A G C A T G C G A T C A T G
T G C A C G T A G T C A A G C T A G T C G C T A T A G C C G A T C T A G G A T C A C G T A C G T A C G T A C G T A C G T A C G T A C G T

POL013.1_MED-1/Jaspar

Match Rank:7
Score:0.54
Offset:2
Orientation:forward strand
Alignment:GAGCTCTGCCAAGGTG
--GCTCCG--------
 T C A G G T C A C A T G T A G C A C G T A G T C C G A T A T C G A T G C A G T C G T C A C T G A C T A G C A T G C G A T C A T G
A C G T A C G T A C T G A G T C A C G T A G T C A G T C A T C G A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

Gfi1b/MA0483.1/Jaspar

Match Rank:8
Score:0.51
Offset:-1
Orientation:forward strand
Alignment:-GAGCTCTGCCAAGGTG
AAATCACAGCA------
 A C G T T C A G G T C A C A T G T A G C A C G T A G T C C G A T A T C G A T G C A G T C G T C A C T G A C T A G C A T G C G A T C A T G
T G C A C G T A C T G A A G C T A G T C G C T A T A G C C G T A C T A G G A T C G C T A A C G T A C G T A C G T A C G T A C G T A C G T

ZNF519(Zf)/HEK293-ZNF519.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:9
Score:0.50
Offset:2
Orientation:reverse strand
Alignment:GAGCTCTGCCAAGGTG
--GCTCGGSCTC----
 T C A G G T C A C A T G T A G C A C G T A G T C C G A T A T C G A T G C A G T C G T C A C T G A C T A G C A T G C G A T C A T G
A C G T A C G T C T A G G T A C A C G T A T G C C T A G A C T G T A C G A G T C A C G T A G T C A C G T A C G T A C G T A C G T

ZNF416(Zf)/HEK293-ZNF416.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:10
Score:0.50
Offset:6
Orientation:reverse strand
Alignment:GAGCTCTGCCAAGGTG
------TGCCCAGNHW
 T C A G G T C A C A T G T A G C A C G T A G T C C G A T A T C G A T G C A G T C G T C A C T G A C T A G C A T G C G A T C A T G
A C G T A C G T A C G T A C G T A C G T A C G T C G A T C A T G A G T C G A T C G T A C G C T A C T A G C A T G G A T C C G T A