Information for 4-CCACWAGGTGGCA (Motif 3)

A G T C A G T C C G T A A G T C G C A T C G T A A C T G C T A G A C G T A C T G A C T G A G T C C G T A
Reverse Opposite:
G A C T A C T G A G T C A G T C G T C A A G T C A G T C C G A T C G T A C T A G A C G T A C T G A C T G
p-value:1e-16
log p-value:-3.691e+01
Information Content per bp:1.849
Number of Target Sequences with motif7.0
Percentage of Target Sequences with motif0.85%
Number of Background Sequences with motif1.6
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets55.0 +/- 22.9bp
Average Position of motif in Background43.5 +/- 15.1bp
Strand Bias (log2 ratio + to - strand density)2.6
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

CTCF(Zf)/CD4+-CTCF-ChIP-Seq(Barski_et_al.)/Homer

Match Rank:1
Score:0.89
Offset:-3
Orientation:reverse strand
Alignment:---CCACWAGGTGGCA----
TGGCCACCAGGTGGCACTNT
 A C G T A C G T A C G T A G T C A G T C C G T A A G T C G C A T C G T A A C T G C T A G A C G T A C T G A C T G A G T C C G T A A C G T A C G T A C G T A C G T
G A C T C A T G C T A G G T A C G A T C C G T A T A G C G A T C C T G A A C T G T C A G C A G T C T A G C A T G G A T C C T G A T A G C G A C T T C G A A C G T

CTCF/MA0139.1/Jaspar

Match Rank:2
Score:0.87
Offset:-3
Orientation:forward strand
Alignment:---CCACWAGGTGGCA---
TGGCCACCAGGGGGCGCTA
 A C G T A C G T A C G T A G T C A G T C C G T A A G T C G C A T C G T A A C T G C T A G A C G T A C T G A C T G A G T C C G T A A C G T A C G T A C G T
G A C T C A T G C T A G G T A C G T A C C G T A T A G C G A T C C T G A C T A G C T A G C A T G C T A G C A T G G T A C C T A G T A G C G A C T T C G A

BORIS(Zf)/K562-CTCFL-ChIP-Seq(GSE32465)/Homer

Match Rank:3
Score:0.85
Offset:-1
Orientation:reverse strand
Alignment:-CCACWAGGTGGCA------
GCCASCAGGGGGCGCYVNNG
 A C G T A G T C A G T C C G T A A G T C G C A T C G T A A C T G C T A G A C G T A C T G A C T G A G T C C G T A A C G T A C G T A C G T A C G T A C G T A C G T
C T A G T A G C A G T C C G T A T A G C G A T C C G T A A C T G C T A G C A T G A C T G A C T G G T A C C T A G A T G C G A T C T C A G A C T G T C A G A T C G

Hic1/MA0739.1/Jaspar

Match Rank:4
Score:0.63
Offset:5
Orientation:reverse strand
Alignment:CCACWAGGTGGCA-
-----GGTTGGCAT
 A G T C A G T C C G T A A G T C G C A T C G T A A C T G C T A G A C G T A C T G A C T G A G T C C G T A A C G T
A C G T A C G T A C G T A C G T A C G T T C A G T A C G A G C T C A G T C A T G A T C G A G T C T C G A A G C T

Tbx5(T-box)/HL1-Tbx5.biotin-ChIP-Seq(GSE21529)/Homer

Match Rank:5
Score:0.62
Offset:5
Orientation:forward strand
Alignment:CCACWAGGTGGCA
-----AGGTGTCA
 A G T C A G T C C G T A A G T C G C A T C G T A A C T G C T A G A C G T A C T G A C T G A G T C C G T A
A C G T A C G T A C G T A C G T A C G T C T G A C T A G A T C G A G C T A C T G G A C T A G T C C T G A

Znf423/MA0116.1/Jaspar

Match Rank:6
Score:0.59
Offset:-3
Orientation:reverse strand
Alignment:---CCACWAGGTGGCA
GCACCCCTGGGTGCC-
 A C G T A C G T A C G T A G T C A G T C C G T A A G T C G C A T C G T A A C T G C T A G A C G T A C T G A C T G A G T C C G T A
A C T G T G A C G T C A G T A C A G T C A G T C G A T C C G A T C T A G A C T G A C T G A C G T A C T G A T G C A G T C A C G T

NeuroD1(bHLH)/Islet-NeuroD1-ChIP-Seq(GSE30298)/Homer

Match Rank:7
Score:0.58
Offset:2
Orientation:reverse strand
Alignment:CCACWAGGTGGCA
--AACAGATGGC-
 A G T C A G T C C G T A A G T C G C A T C G T A A C T G C T A G A C G T A C T G A C T G A G T C C G T A
A C G T A C G T C T G A T C G A A G T C G T C A A C T G T G C A G C A T A C T G A C T G A G T C A C G T

PB0029.1_Hic1_1/Jaspar

Match Rank:8
Score:0.58
Offset:1
Orientation:reverse strand
Alignment:CCACWAGGTGGCA----
-NGTAGGTTGGCATNNN
 A G T C A G T C C G T A A G T C G C A T C G T A A C T G C T A G A C G T A C T G A C T G A G T C C G T A A C G T A C G T A C G T A C G T
A C G T C T A G C T A G A G C T C G T A T C A G T C A G A C G T C A G T A C T G A T C G A G T C C G T A G A C T T G C A T C A G G C A T

SCRT1/MA0743.1/Jaspar

Match Rank:9
Score:0.57
Offset:-2
Orientation:forward strand
Alignment:--CCACWAGGTGGCA
GAGCAACAGGTGGTT
 A C G T A C G T A G T C A G T C C G T A A G T C G C A T C G T A A C T G C T A G A C G T A C T G A C T G A G T C C G T A
T C A G G C T A A C T G G A T C G T C A C G T A G T A C C G T A C T A G A C T G A G C T C A T G A C T G A G C T G A C T

ZNF354C/MA0130.1/Jaspar

Match Rank:10
Score:0.56
Offset:-2
Orientation:forward strand
Alignment:--CCACWAGGTGGCA
ATCCAC---------
 A C G T A C G T A G T C A G T C C G T A A G T C G C A T C G T A A C T G C T A G A C G T A C T G A C T G A G T C C G T A
T G C A G C A T A G T C A G T C C G T A A T G C A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T