Information for 10-CTCACGCCAC (Motif 18)

A T G C G C A T A G T C C T G A G A T C C T A G A G T C A G T C G C T A A G T C
Reverse Opposite:
A C T G C G A T A C T G A C T G G A T C C T A G G A C T A C T G C G T A A T C G
p-value:1e-7
log p-value:-1.760e+01
Information Content per bp:1.839
Number of Target Sequences with motif13.0
Percentage of Target Sequences with motif1.57%
Number of Background Sequences with motif95.4
Percentage of Background Sequences with motif0.20%
Average Position of motif in Targets40.4 +/- 32.5bp
Average Position of motif in Background45.5 +/- 28.0bp
Strand Bias (log2 ratio + to - strand density)-0.7
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Srebp2(bHLH)/HepG2-Srebp2-ChIP-Seq(GSE31477)/Homer

Match Rank:1
Score:0.85
Offset:-2
Orientation:forward strand
Alignment:--CTCACGCCAC
CNGTCACGCCAC
 A C G T A C G T A T G C G C A T A G T C C T G A G A T C C T A G A G T C A G T C G C T A A G T C
G T A C C T A G T C A G A G C T T A G C C G T A A T G C T A C G A G T C G T A C G T C A A G T C

Srebp1a(bHLH)/HepG2-Srebp1a-ChIP-Seq(GSE31477)/Homer

Match Rank:2
Score:0.82
Offset:0
Orientation:forward strand
Alignment:CTCACGCCAC
ATCACCCCAT
 A T G C G C A T A G T C C T G A G A T C C T A G A G T C A G T C G C T A A G T C
T C G A G C A T A T G C C T G A A T G C T A G C A G T C G T A C T C G A A G C T

SREBF1/MA0595.1/Jaspar

Match Rank:3
Score:0.78
Offset:0
Orientation:forward strand
Alignment:CTCACGCCAC
ATCACCCCAC
 A T G C G C A T A G T C C T G A G A T C C T A G A G T C A G T C G C T A A G T C
T C G A A C G T A G T C C G T A A T G C T A G C A G T C T A G C C G T A A G T C

SREBF2/MA0596.1/Jaspar

Match Rank:4
Score:0.73
Offset:0
Orientation:reverse strand
Alignment:CTCACGCCAC
ATCACCCCAT
 A T G C G C A T A G T C C T G A G A T C C T A G A G T C A G T C G C T A A G T C
C T G A A C G T A G T C C G T A A T G C T A G C A G T C A T G C C G T A A G C T

PB0164.1_Smad3_2/Jaspar

Match Rank:5
Score:0.67
Offset:-3
Orientation:forward strand
Alignment:---CTCACGCCAC----
TACGCCCCGCCACTCTG
 A C G T A C G T A C G T A T G C G C A T A G T C C T G A G A T C C T A G A G T C A G T C G C T A A G T C A C G T A C G T A C G T A C G T
C A G T G T C A G T A C A C T G G A T C A G T C T A G C A T G C T A C G A G T C G T A C G T C A G T A C G A C T A G T C G A C T A C T G

Arnt:Ahr(bHLH)/MCF7-Arnt-ChIP-Seq(Lo_et_al.)/Homer

Match Rank:6
Score:0.67
Offset:-1
Orientation:forward strand
Alignment:-CTCACGCCAC
TBGCACGCAA-
 A C G T A T G C G C A T A G T C C T G A G A T C C T A G A G T C A G T C G C T A A G T C
G C A T A T C G C A T G G T A C G C T A A G T C T C A G T G A C G T C A T G C A A C G T

Ahr::Arnt/MA0006.1/Jaspar

Match Rank:7
Score:0.64
Offset:2
Orientation:reverse strand
Alignment:CTCACGCCAC
--CACGCA--
 A T G C G C A T A G T C C T G A G A T C C T A G A G T C A G T C G C T A A G T C
A C G T A C G T A G T C C G T A G T A C C T A G G T A C C T G A A C G T A C G T

E2F4/MA0470.1/Jaspar

Match Rank:8
Score:0.64
Offset:-2
Orientation:reverse strand
Alignment:--CTCACGCCAC
NNTTCCCGCCC-
 A C G T A C G T A T G C G C A T A G T C C T G A G A T C C T A G A G T C A G T C G C T A A G T C
A G T C A G T C A G C T A G C T A T G C A T G C A G T C A C T G A T G C A T G C T G A C A C G T

E2F7(E2F)/Hela-E2F7-ChIP-Seq(GSE32673)/Homer

Match Rank:9
Score:0.64
Offset:-3
Orientation:forward strand
Alignment:---CTCACGCCAC
VDTTTCCCGCCA-
 A C G T A C G T A C G T A T G C G C A T A G T C C T G A G A T C C T A G A G T C A G T C G C T A A G T C
T A G C C G A T A C G T A G C T A G C T A G T C A T G C A G T C A C T G A T G C A T G C G C T A A C G T

SP3/MA0746.1/Jaspar

Match Rank:10
Score:0.63
Offset:0
Orientation:forward strand
Alignment:CTCACGCCAC-
GCCACGCCCCC
 A T G C G C A T A G T C C T G A G A T C C T A G A G T C A G T C G C T A A G T C A C G T
T A C G G T A C G T A C T G C A G A T C C T A G G T A C G T A C A G T C G T A C G A T C