Information for 7-ACGGTGARTTSSC (Motif 9)

C G T A A T G C A C T G A C T G A C G T A C T G C G T A C T G A A C G T A C G T A T C G A T G C A G T C
Reverse Opposite:
A C T G A T C G T A C G C G T A C G T A A G C T A C G T A G T C C G T A A G T C G T A C A T C G A C G T
p-value:1e-11
log p-value:-2.574e+01
Information Content per bp:1.889
Number of Target Sequences with motif5.0
Percentage of Target Sequences with motif0.69%
Number of Background Sequences with motif1.5
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets58.2 +/- 23.2bp
Average Position of motif in Background58.1 +/- 27.2bp
Strand Bias (log2 ratio + to - strand density)0.6
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

NFkB-p65-Rel(RHD)/ThioMac-LPS-Expression(GSE23622)/Homer

Match Rank:1
Score:0.59
Offset:3
Orientation:reverse strand
Alignment:ACGGTGARTTSSC
---GGGAATTTCC
 C G T A A T G C A C T G A C T G A C G T A C T G C G T A C T G A A C G T A C G T A T C G A T G C A G T C
A C G T A C G T A C G T A C T G C T A G A C T G C T G A T C G A C G A T A G C T C G A T G T A C G T A C

Gfi1/MA0038.1/Jaspar

Match Rank:2
Score:0.58
Offset:1
Orientation:reverse strand
Alignment:ACGGTGARTTSSC
-CNGTGATTTN--
 C G T A A T G C A C T G A C T G A C G T A C T G C G T A C T G A A C G T A C G T A T C G A T G C A G T C
A C G T A T G C C G T A A T C G C G A T A C T G G C T A A C G T A C G T A C G T C T A G A C G T A C G T

RELA/MA0107.1/Jaspar

Match Rank:3
Score:0.57
Offset:3
Orientation:forward strand
Alignment:ACGGTGARTTSSC
---GGGAATTTCC
 C G T A A T G C A C T G A C T G A C G T A C T G C G T A C T G A A C G T A C G T A T C G A T G C A G T C
A C G T A C G T A C G T A T C G A C T G A C T G C T G A T C G A C G A T A C G T A G C T A G T C A G T C

NFkB-p65(RHD)/GM12787-p65-ChIP-Seq(GSE19485)/Homer

Match Rank:4
Score:0.57
Offset:1
Orientation:forward strand
Alignment:ACGGTGARTTSSC
-NGGGGATTTCCC
 C G T A A T G C A C T G A C T G A C G T A C T G C G T A C T G A A C G T A C G T A T C G A T G C A G T C
A C G T C G T A C A T G C A T G A C T G C T A G T C G A G C A T C G A T A G C T A G T C G A T C G T A C

SD0001.1_at_AC_acceptor/Jaspar

Match Rank:5
Score:0.57
Offset:0
Orientation:forward strand
Alignment:ACGGTGARTTSSC
CAGGTAAGTAT--
 C G T A A T G C A C T G A C T G A C G T A C T G C G T A C T G A A C G T A C G T A T C G A T G C A G T C
T G A C C G T A C T A G A C T G A C G T C T G A C G T A C T A G C G A T C T G A G A C T A C G T A C G T

Foxh1(Forkhead)/hESC-FOXH1-ChIP-Seq(GSE29422)/Homer

Match Rank:6
Score:0.56
Offset:0
Orientation:forward strand
Alignment:ACGGTGARTTSSC
NNTGTGGATTSS-
 C G T A A T G C A C T G A C T G A C G T A C T G C G T A C T G A A C G T A C G T A T C G A T G C A G T C
C A T G G A C T G C A T A C T G A G C T A C T G A C T G C G T A G C A T A G C T A T C G T A C G A C G T

PH0037.1_Hdx/Jaspar

Match Rank:7
Score:0.56
Offset:-1
Orientation:reverse strand
Alignment:-ACGGTGARTTSSC---
TNNNATGATTTCNNCNN
 A C G T C G T A A T G C A C T G A C T G A C G T A C T G C G T A C T G A A C G T A C G T A T C G A T G C A G T C A C G T A C G T A C G T
A C G T C A T G T A G C C T A G C T G A C G A T A T C G G T C A G C A T G C A T A C G T G A T C C A T G G T A C T G A C G A C T G C A T

NFKB2/MA0778.1/Jaspar

Match Rank:8
Score:0.55
Offset:1
Orientation:reverse strand
Alignment:ACGGTGARTTSSC-
-AGGGGAATCCCCT
 C G T A A T G C A C T G A C T G A C G T A C T G C G T A C T G A A C G T A C G T A T C G A T G C A G T C A C G T
A C G T T C G A C T A G C A T G C A T G C T A G C T G A C G T A A C G T G A T C G T A C G T A C A G T C A C G T

PB0139.1_Irf5_2/Jaspar

Match Rank:9
Score:0.55
Offset:-3
Orientation:forward strand
Alignment:---ACGGTGARTTSSC
TTGACCGAGAATTCC-
 A C G T A C G T A C G T C G T A A T G C A C T G A C T G A C G T A C T G C G T A C T G A A C G T A C G T A T C G A T G C A G T C
A G C T G C A T C T A G C G T A G A C T G T A C C T A G C T G A A T C G C G T A C T G A G A C T G A C T A G T C T A G C A C G T

NFKB1/MA0105.4/Jaspar

Match Rank:10
Score:0.55
Offset:1
Orientation:reverse strand
Alignment:ACGGTGARTTSSC-
-AGGGGATTCCCCT
 C G T A A T G C A C T G A C T G A C G T A C T G C G T A C T G A A C G T A C G T A T C G A T G C A G T C A C G T
A C G T T G C A C T A G C A T G C A T G C T A G T C G A G C A T A G C T G A T C G T A C T A G C G A T C A C G T