Information for 5-GCCAGTAWTTGCTCAG (Motif 6)

A C T G A T G C G T A C C G T A A C T G A G C T T C G A C G T A A C G T C G A T A C T G A G T C A C G T A G T C G C T A C T A G
Reverse Opposite:
G A T C C A G T A C T G C G T A T A C G T G A C C G T A G T C A G C A T A C G T C T G A A G T C A C G T A C T G A T C G G T A C
p-value:1e-12
log p-value:-2.820e+01
Information Content per bp:1.716
Number of Target Sequences with motif7.0
Percentage of Target Sequences with motif0.96%
Number of Background Sequences with motif4.7
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets71.1 +/- 17.8bp
Average Position of motif in Background56.3 +/- 28.6bp
Strand Bias (log2 ratio + to - strand density)0.4
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0195.1_Zbtb3_2/Jaspar

Match Rank:1
Score:0.63
Offset:-5
Orientation:reverse strand
Alignment:-----GCCAGTAWTTGCTCAG
NNNNTGCCAGTGATTG-----
 A C G T A C G T A C G T A C G T A C G T A C T G A T G C G T A C C G T A A C T G A G C T T C G A C G T A A C G T C G A T A C T G A G T C A C G T A G T C G C T A C T A G
G C T A G C A T C G A T G A T C G A C T T C A G T G A C T A G C C G T A A C T G A G C T C A T G C G T A A G C T C G A T T C A G A C G T A C G T A C G T A C G T A C G T

ZNF528(Zf)/HEK293-ZNF528.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:2
Score:0.58
Offset:-2
Orientation:reverse strand
Alignment:--GCCAGTAWTTGCTCAG
AGGGAAGTCATTTCT---
 A C G T A C G T A C T G A T G C G T A C C G T A A C T G A G C T T C G A C G T A A C G T C G A T A C T G A G T C A C G T A G T C G C T A C T A G
C T G A C T A G C T A G T C A G C G T A C T G A C T A G A G C T G T A C C T G A A G C T A G C T A C G T G A T C G A C T A C G T A C G T A C G T

EBNA1(EBV-virus)/Raji-EBNA1-ChIP-Seq(GSE30709)/Homer

Match Rank:3
Score:0.53
Offset:0
Orientation:forward strand
Alignment:GCCAGTAWTTGCTCAG----
GGYAGCAYDTGCTDCCCNNN
 A C T G A T G C G T A C C G T A A C T G A G C T T C G A C G T A A C G T C G A T A C T G A G T C A C G T A G T C G C T A C T A G A C G T A C G T A C G T A C G T
A C T G C T A G G A T C C G T A C T A G A G T C T G C A G A C T C G T A A C G T T C A G A G T C A C G T C T G A A G T C A G T C G A T C C G T A T C A G T A C G

PH0062.1_Hoxb7/Jaspar

Match Rank:4
Score:0.53
Offset:-1
Orientation:reverse strand
Alignment:-GCCAGTAWTTGCTCAG
TNNCATTAATTANTNC-
 A C G T A C T G A T G C G T A C C G T A A C T G A G C T T C G A C G T A A C G T C G A T A C T G A G T C A C G T A G T C G C T A C T A G
A G C T C G A T T A C G G T A C T G C A A C G T G A C T G T C A G C T A C G A T C A G T C T G A T G A C A C G T T C G A T A G C A C G T

ZNF382(Zf)/HEK293-ZNF382.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:5
Score:0.53
Offset:-3
Orientation:forward strand
Alignment:---GCCAGTAWTTGCTCAG-
GNCTGTASTRNTGBCTCHTT
 A C G T A C G T A C G T A C T G A T G C G T A C C G T A A C T G A G C T T C G A C G T A A C G T C G A T A C T G A G T C A C G T A G T C G C T A C T A G A C G T
C T A G G A C T G A T C A C G T A T C G A G C T C T G A A T C G C G A T C T A G G A T C G A C T C A T G A T C G G T A C G A C T A G T C G C A T A G C T C G A T

Hand2(bHLH)/Mesoderm-Hand2-ChIP-Seq(GSE61475)/Homer

Match Rank:6
Score:0.52
Offset:0
Orientation:reverse strand
Alignment:GCCAGTAWTTGCTCAG
GYCTGGYYTNTGTCA-
 A C T G A T G C G T A C C G T A A C T G A G C T T C G A C G T A A C G T C G A T A C T G A G T C A C G T A G T C G C T A C T A G
A T C G A G C T A G T C A C G T A C T G A T C G A G C T G A C T G C A T A G C T G A C T T A C G A G C T G A T C G C T A A C G T

PH0039.1_Mnx1/Jaspar

Match Rank:7
Score:0.52
Offset:-1
Orientation:reverse strand
Alignment:-GCCAGTAWTTGCTCAG
NNNCACTAATTANTNN-
 A C G T A C T G A T G C G T A C C G T A A C T G A G C T T C G A C G T A A C G T C G A T A C T G A G T C A C G T A G T C G C T A C T A G
A T G C C T A G A T G C G A T C T G C A A T G C G A C T G T C A C G T A G A C T A C G T C T G A T A C G A C G T T G C A T G A C A C G T

PH0007.1_Barx1/Jaspar

Match Rank:8
Score:0.52
Offset:1
Orientation:forward strand
Alignment:GCCAGTAWTTGCTCAG-
-AAAGTAATTAGTGAAT
 A C T G A T G C G T A C C G T A A C T G A G C T T C G A C G T A A C G T C G A T A C T G A G T C A C G T A G T C G C T A C T A G A C G T
A C G T G T C A G T C A T C G A T A C G G A C T T G C A G T C A A C G T A C G T C T G A A T C G A G C T C A T G G C T A C G T A G C A T

Hoxd8/MA0910.1/Jaspar

Match Rank:9
Score:0.52
Offset:-2
Orientation:reverse strand
Alignment:--GCCAGTAWTTGCTCAG
NAGCCATTAATTANTTA-
 A C G T A C G T A C T G A T G C G T A C C G T A A C T G A G C T T C G A C G T A A C G T C G A T A C T G A G T C A C G T A G T C G C T A C T A G
C G A T G C T A C T A G G A T C G A T C C T G A C G A T G C A T C G T A C G T A C G A T C A G T C T G A G C A T G A C T C G A T G T C A A C G T

PH0080.1_Hoxd8/Jaspar

Match Rank:10
Score:0.52
Offset:-2
Orientation:reverse strand
Alignment:--GCCAGTAWTTGCTCAG
NAGCCATTAATTANTTA-
 A C G T A C G T A C T G A T G C G T A C C G T A A C T G A G C T T C G A C G T A A C G T C G A T A C T G A G T C A C G T A G T C G C T A C T A G
C G A T G C T A C T A G G A T C G A T C C T G A C G A T G C A T C G T A C G T A C G A T C A G T C T G A G C A T G A C T C G A T G T C A A C G T