Information for 17-ATGCTAGATT (Motif 49)

G T C A A C G T A T C G A G T C A C G T C G T A A C T G C G T A A C G T C G A T
Reverse Opposite:
C G T A C G T A A C G T A G T C A C G T C G T A A C T G A T G C C G T A A C G T
p-value:1e-6
log p-value:-1.543e+01
Information Content per bp:1.919
Number of Target Sequences with motif5.0
Percentage of Target Sequences with motif0.69%
Number of Background Sequences with motif8.7
Percentage of Background Sequences with motif0.02%
Average Position of motif in Targets72.8 +/- 34.4bp
Average Position of motif in Background40.8 +/- 21.8bp
Strand Bias (log2 ratio + to - strand density)2.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0090.1_Zbtb12_1/Jaspar

Match Rank:1
Score:0.64
Offset:-5
Orientation:forward strand
Alignment:-----ATGCTAGATT--
CTAAGGTTCTAGATCAC
 A C G T A C G T A C G T A C G T A C G T G T C A A C G T A T C G A G T C A C G T C G T A A C T G C G T A A C G T C G A T A C G T A C G T
A T G C A C G T G C T A T C G A A C T G C T A G C G A T C G A T A G T C A G C T T C G A C T A G T C G A G C A T A G T C T G C A A G T C

Hand1::Tcf3/MA0092.1/Jaspar

Match Rank:2
Score:0.62
Offset:0
Orientation:reverse strand
Alignment:ATGCTAGATT
ATGCCAGACN
 G T C A A C G T A T C G A G T C A C G T C G T A A C T G C G T A A C G T C G A T
C G T A G C A T C A T G T A G C A G T C C G T A C T A G C G T A G A T C T A G C

HOXA2(Homeobox)/mES-Hoxa2-ChIP-Seq(Donaldson_et_al.)/Homer

Match Rank:3
Score:0.62
Offset:0
Orientation:reverse strand
Alignment:ATGCTAGATT--
ATGATKGATGRC
 G T C A A C G T A T C G A G T C A C G T C G T A A C T G C G T A A C G T C G A T A C G T A C G T
C T G A C G A T A T C G C G T A C G A T C A G T C T A G C G T A C G A T A C T G C T G A A T G C

PB0181.1_Spdef_2/Jaspar

Match Rank:4
Score:0.58
Offset:-6
Orientation:forward strand
Alignment:------ATGCTAGATT
GATAACATCCTAGTAG
 A C G T A C G T A C G T A C G T A C G T A C G T G T C A A C G T A T C G A G T C A C G T C G T A A C T G C G T A A C G T C G A T
C T A G C G T A A C G T G C T A C T G A A G T C C G T A C G A T G A T C A G T C A G C T G C T A A C T G G C A T C G T A T C A G

DMRT3/MA0610.1/Jaspar

Match Rank:5
Score:0.58
Offset:-1
Orientation:reverse strand
Alignment:-ATGCTAGATT
NTTGATACATT
 A C G T G T C A A C G T A T C G A G T C A C G T C G T A A C T G C G T A A C G T C G A T
C G T A C G A T A C G T A C T G G C T A A C G T C G T A A G T C C G T A C G A T A C G T

ZBTB12(Zf)/HEK293-ZBTB12.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:6
Score:0.58
Offset:-4
Orientation:reverse strand
Alignment:----ATGCTAGATT-
BCNGGTTCTAGANCN
 A C G T A C G T A C G T A C G T G T C A A C G T A T C G A G T C A C G T C G T A A C T G C G T A A C G T C G A T A C G T
A G C T T G A C C T A G C A T G C T A G G A C T A C G T A G T C A G C T C T G A T A C G T C G A C G A T A G T C G A C T

PBX1/MA0070.1/Jaspar

Match Rank:7
Score:0.56
Offset:-1
Orientation:reverse strand
Alignment:-ATGCTAGATT-
TTTGATTGATGN
 A C G T G T C A A C G T A T C G A G T C A C G T C G T A A C T G C G T A A C G T C G A T A C G T
C G A T G C A T C A G T A C T G G T C A C G A T A C G T A C T G C G T A A C G T A C T G C A T G

Pdx1(Homeobox)/Islet-Pdx1-ChIP-Seq(SRA008281)/Homer

Match Rank:8
Score:0.56
Offset:1
Orientation:reverse strand
Alignment:ATGCTAGATT-
-TGATTGATGA
 G T C A A C G T A T C G A G T C A C G T C G T A A C T G C G T A A C G T C G A T A C G T
A C G T C G A T T C A G G T C A A G C T C G A T C T A G C G T A A C G T C A T G C T G A

GATA3(Zf)/iTreg-Gata3-ChIP-Seq(GSE20898)/Homer

Match Rank:9
Score:0.55
Offset:5
Orientation:forward strand
Alignment:ATGCTAGATT---
-----AGATAASR
 G T C A A C G T A T C G A G T C A C G T C G T A A C T G C G T A A C G T C G A T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T G C T A A T C G G C T A G A C T G C T A T C G A T A G C T C G A

GATA5/MA0766.1/Jaspar

Match Rank:10
Score:0.55
Offset:5
Orientation:forward strand
Alignment:ATGCTAGATT---
-----AGATAAGA
 G T C A A C G T A T C G A G T C A C G T C G T A A C T G C G T A A C G T C G A T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T G C T A A C T G C T G A A C G T G C T A C T G A T A C G T C G A