Information for 19-RCAAGAGCTAATG (Motif 46)

C T G A A G T C G T C A G T C A C A T G C G T A A C T G A T G C A C G T C T G A G C T A C A G T A C T G
Reverse Opposite:
A G T C G T C A C A G T A G C T C G T A A T C G A G T C C G A T G T A C A C G T A C G T A C T G G A C T
p-value:1e-8
log p-value:-1.865e+01
Information Content per bp:1.802
Number of Target Sequences with motif6.0
Percentage of Target Sequences with motif0.82%
Number of Background Sequences with motif9.4
Percentage of Background Sequences with motif0.02%
Average Position of motif in Targets41.3 +/- 22.0bp
Average Position of motif in Background48.1 +/- 32.0bp
Strand Bias (log2 ratio + to - strand density)2.3
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Tcf21/MA0832.1/Jaspar

Match Rank:1
Score:0.61
Offset:0
Orientation:forward strand
Alignment:RCAAGAGCTAATG-
GCAACAGCTGTTGT
 C T G A A G T C G T C A G T C A C A T G C G T A A C T G A T G C A C G T C T G A G C T A C A G T A C T G A C G T
T C A G G A T C C T G A G T C A A G T C G T C A A C T G A G T C A C G T A C T G A C G T G A C T T C A G A G C T

PB0051.1_Osr2_1/Jaspar

Match Rank:2
Score:0.60
Offset:2
Orientation:reverse strand
Alignment:RCAAGAGCTAATG-----
--CNNNGCTACTGTANNN
 C T G A A G T C G T C A G T C A C A T G C G T A A C T G A T G C A C G T C T G A G C T A C A G T A C T G A C G T A C G T A C G T A C G T A C G T
A C G T A C G T G A T C C G A T A C G T C G A T T C A G A G T C A G C T G C T A A G T C A G C T C A T G A C G T C G T A A G T C C G T A C G A T

PB0050.1_Osr1_1/Jaspar

Match Rank:3
Score:0.58
Offset:2
Orientation:reverse strand
Alignment:RCAAGAGCTAATG-----
--TNNTGCTACTGTNNNN
 C T G A A G T C G T C A G T C A C A T G C G T A A C T G A T G C A C G T C T G A G C T A C A G T A C T G A C G T A C G T A C G T A C G T A C G T
A C G T A C G T G A C T C G A T A C G T C G A T T C A G A G T C A G C T G C T A A G T C A G C T C T A G A C G T C G T A G C T A C G T A C G A T

NKX2-3/MA0672.1/Jaspar

Match Rank:4
Score:0.57
Offset:-1
Orientation:reverse strand
Alignment:-RCAAGAGCTAATG
NTCAAGTGGN----
 A C G T C T G A A G T C G T C A G T C A C A T G C G T A A C T G A T G C A C G T C T G A G C T A C A G T A C T G
A G C T G C A T A G T C C T G A G T C A A C T G C G A T C T A G A T C G A C G T A C G T A C G T A C G T A C G T

TFAP4/MA0691.1/Jaspar

Match Rank:5
Score:0.56
Offset:2
Orientation:forward strand
Alignment:RCAAGAGCTAATG
--AACAGCTGAT-
 C T G A A G T C G T C A G T C A C A T G C G T A A C T G A T G C A C G T C T G A G C T A C A G T A C T G
A C G T A C G T T G C A G C T A A G T C G T C A A T C G T A G C G A C T A T C G C G T A A G C T A C G T

MSC/MA0665.1/Jaspar

Match Rank:6
Score:0.55
Offset:2
Orientation:forward strand
Alignment:RCAAGAGCTAATG
--AACAGCTGTT-
 C T G A A G T C G T C A G T C A C A T G C G T A A C T G A T G C A C G T C T G A G C T A C A G T A C T G
A C G T A C G T C T G A T G C A A T G C C G T A A T C G A T G C A C G T A C T G A G C T A G C T A C G T

NKX2-8/MA0673.1/Jaspar

Match Rank:7
Score:0.55
Offset:-1
Orientation:reverse strand
Alignment:-RCAAGAGCTAATG
NTCAAGTGG-----
 A C G T C T G A A G T C G T C A G T C A C A T G C G T A A C T G A T G C A C G T C T G A G C T A C A G T A C T G
A G C T C G A T A T G C C T G A C T G A C T A G C A G T C T A G A T C G A C G T A C G T A C G T A C G T A C G T

Nkx2.1(Homeobox)/LungAC-Nkx2.1-ChIP-Seq(GSE43252)/Homer

Match Rank:8
Score:0.53
Offset:-1
Orientation:reverse strand
Alignment:-RCAAGAGCTAATG
CTYRAGTGSY----
 A C G T C T G A A G T C G T C A G T C A C A T G C G T A A C T G A T G C A C G T C T G A G C T A C A G T A C T G
A T G C G C A T A G C T C T A G C G T A A C T G C G A T C T A G A T G C G A T C A C G T A C G T A C G T A C G T

SCRT2/MA0744.1/Jaspar

Match Rank:9
Score:0.53
Offset:-2
Orientation:forward strand
Alignment:--RCAAGAGCTAATG
ATGCAACAGGTGG--
 A C G T A C G T C T G A A G T C G T C A G T C A C A T G C G T A A C T G A T G C A C G T C T G A G C T A C A G T A C T G
T C G A G C A T A C T G G T A C T G C A C G T A G T A C G T C A T C A G A T C G G C A T C A T G A T C G A C G T A C G T

PH0111.1_Nkx2-2/Jaspar

Match Rank:10
Score:0.52
Offset:-5
Orientation:reverse strand
Alignment:-----RCAAGAGCTAATG
NANTTTCAAGTGGTTAN-
 A C G T A C G T A C G T A C G T A C G T C T G A A G T C G T C A G T C A C A T G C G T A A C T G A T G C A C G T C T G A G C T A C A G T A C T G
G C T A T G C A G C A T G C A T A G C T G C A T A G T C C T G A C G T A A C T G C G A T C T A G A T C G G A C T A G C T G C T A C G A T A C G T