Information for 17-TGCCAGCTGGAGA (Motif 43)

A C G T A C T G A G T C A T G C C G T A A C T G A G T C A C G T A C T G A C T G C G T A A C T G C T G A
Reverse Opposite:
G A C T A G T C C G A T A G T C A G T C C G T A A C T G G T A C A C G T A T C G A C T G A G T C C G T A
p-value:1e-8
log p-value:-1.885e+01
Information Content per bp:1.915
Number of Target Sequences with motif5.0
Percentage of Target Sequences with motif0.69%
Number of Background Sequences with motif4.4
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets51.6 +/- 8.2bp
Average Position of motif in Background54.9 +/- 14.1bp
Strand Bias (log2 ratio + to - strand density)2.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Atoh1(bHLH)/Cerebellum-Atoh1-ChIP-Seq(GSE22111)/Homer

Match Rank:1
Score:0.69
Offset:-1
Orientation:forward strand
Alignment:-TGCCAGCTGGAGA
VNAVCAGCTGGC--
 A C G T A C G T A C T G A G T C A T G C C G T A A C T G A G T C A C G T A C T G A C T G C G T A A C T G C T G A
T C A G A C G T T C G A T A G C A G T C C G T A A C T G G T A C A C G T A C T G A T C G A G T C A C G T A C G T

Tcf21(bHLH)/ArterySmoothMuscle-Tcf21-ChIP-Seq(GSE61369)/Homer

Match Rank:2
Score:0.67
Offset:0
Orientation:forward strand
Alignment:TGCCAGCTGGAGA
NAACAGCTGG---
 A C G T A C T G A G T C A T G C C G T A A C T G A G T C A C G T A C T G A C T G C G T A A C T G C T G A
C G A T T G C A T G C A G A T C C G T A A C T G T G A C G A C T C A T G A C T G A C G T A C G T A C G T

NeuroD1(bHLH)/Islet-NeuroD1-ChIP-Seq(GSE30298)/Homer

Match Rank:3
Score:0.67
Offset:1
Orientation:forward strand
Alignment:TGCCAGCTGGAGA
-GCCATCTGTT--
 A C G T A C T G A G T C A T G C C G T A A C T G A G T C A C G T A C T G A C T G C G T A A C T G C T G A
A C G T T C A G T G A C G T A C C G T A A C G T T G A C A C G T T C A G A G C T G A C T A C G T A C G T

Tcf12(bHLH)/GM12878-Tcf12-ChIP-Seq(GSE32465)/Homer

Match Rank:4
Score:0.67
Offset:2
Orientation:forward strand
Alignment:TGCCAGCTGGAGA
--NCAGCTGCTG-
 A C G T A C T G A G T C A T G C C G T A A C T G A G T C A C G T A C T G A C T G C G T A A C T G C T G A
A C G T A C G T T C G A A G T C C G T A A T C G A T G C C G A T A C T G A G T C A G C T A C T G A C G T

HEB(bHLH)/mES-Heb-ChIP-Seq(GSE53233)/Homer

Match Rank:5
Score:0.66
Offset:0
Orientation:reverse strand
Alignment:TGCCAGCTGGAGA
NNVCAGCTGB---
 A C G T A C T G A G T C A T G C C G T A A C T G A G T C A C G T A C T G A C T G C G T A A C T G C T G A
C A T G T C A G T G A C G T A C G T C A T A C G T A G C G C A T T A C G A C T G A C G T A C G T A C G T

Ascl1(bHLH)/NeuralTubes-Ascl1-ChIP-Seq(GSE55840)/Homer

Match Rank:6
Score:0.66
Offset:-1
Orientation:forward strand
Alignment:-TGCCAGCTGGAGA
NNVVCAGCTGBN--
 A C G T A C G T A C T G A G T C A T G C C G T A A C T G A G T C A C G T A C T G A C T G C G T A A C T G C T G A
C T A G A G T C T A C G T A C G T G A C C G T A A C T G T A G C G C A T C A T G A T G C A G C T A C G T A C G T

Ap4(bHLH)/AML-Tfap4-ChIP-Seq(GSE45738)/Homer

Match Rank:7
Score:0.66
Offset:0
Orientation:forward strand
Alignment:TGCCAGCTGGAGA
NAHCAGCTGD---
 A C G T A C T G A G T C A T G C C G T A A C T G A G T C A C G T A C T G A C T G C G T A A C T G C T G A
G T C A T G C A G C T A A G T C C G T A A C T G T G A C G C A T T C A G C A G T A C G T A C G T A C G T

Myog/MA0500.1/Jaspar

Match Rank:8
Score:0.66
Offset:1
Orientation:forward strand
Alignment:TGCCAGCTGGAGA
-GACAGCTGCAG-
 A C G T A C T G A G T C A T G C C G T A A C T G A G T C A C G T A C T G A C T G C G T A A C T G C T G A
A C G T T C A G T C G A A G T C C G T A A C T G T A G C A C G T A C T G T A G C C T G A T A C G A C G T

CTCF(Zf)/CD4+-CTCF-ChIP-Seq(Barski_et_al.)/Homer

Match Rank:9
Score:0.65
Offset:-4
Orientation:forward strand
Alignment:----TGCCAGCTGGAGA---
ANAGTGCCACCTGGTGGCCA
 A C G T A C G T A C G T A C G T A C G T A C T G A G T C A T G C C G T A A C T G A G T C A C G T A C T G A C T G C G T A A C T G C T G A A C G T A C G T A C G T
T G C A A G C T C T G A A T C G G A C T C T A G G T A C G A T C G T C A A G T C G T A C G A C T C T A G A T C G G C A T C A T G C A T G G A T C G T A C C T G A

Tcf12/MA0521.1/Jaspar

Match Rank:10
Score:0.65
Offset:1
Orientation:forward strand
Alignment:TGCCAGCTGGAGA
-AACAGCTGCAG-
 A C G T A C T G A G T C A T G C C G T A A C T G A G T C A C G T A C T G A C T G C G T A A C T G C T G A
A C G T T C G A T C G A A G T C C G T A C T A G T A G C A C G T A C T G T A G C C G T A T A C G A C G T