Information for 6-GTCAAACAGG (Motif 9)

T A C G C A G T G T A C C G T A G T C A G T C A A G T C G T C A T A C G A T C G
Reverse Opposite:
A T G C A T G C C A G T C T A G A C G T A C G T A C G T A C T G G T C A A T G C
p-value:1e-11
log p-value:-2.612e+01
Information Content per bp:1.824
Number of Target Sequences with motif21.0
Percentage of Target Sequences with motif2.79%
Number of Background Sequences with motif176.3
Percentage of Background Sequences with motif0.38%
Average Position of motif in Targets49.0 +/- 24.9bp
Average Position of motif in Background49.1 +/- 30.8bp
Strand Bias (log2 ratio + to - strand density)0.2
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Pknox1(Homeobox)/ES-Prep1-ChIP-Seq(GSE63282)/Homer

Match Rank:1
Score:0.63
Offset:-3
Orientation:forward strand
Alignment:---GTCAAACAGG
SCTGTCAVTCAV-
 A C G T A C G T A C G T T A C G C A G T G T A C C G T A G T C A G T C A A G T C G T C A T A C G A T C G
T A C G A T G C G A C T A C T G A G C T A G T C G T C A T G C A A C G T A G T C G C T A T G C A A C G T

Foxo1/MA0480.1/Jaspar

Match Rank:2
Score:0.62
Offset:0
Orientation:reverse strand
Alignment:GTCAAACAGG-
TGTAAACAGGA
 T A C G C A G T G T A C C G T A G T C A G T C A A G T C G T C A T A C G A T C G A C G T
C G A T C T A G C G A T G T C A C G T A C G T A A G T C C G T A T C A G T A C G G T C A

Pbx3(Homeobox)/GM12878-PBX3-ChIP-Seq(GSE32465)/Homer

Match Rank:3
Score:0.62
Offset:-3
Orientation:forward strand
Alignment:---GTCAAACAGG
NCTGTCAATCAN-
 A C G T A C G T A C G T T A C G C A G T G T A C C G T A G T C A G T C A A G T C G T C A T A C G A T C G
T A G C T A G C G A C T C T A G A G C T A G T C G T C A T G C A A C G T A T G C G C T A T G C A A C G T

MEIS3/MA0775.1/Jaspar

Match Rank:4
Score:0.61
Offset:-3
Orientation:reverse strand
Alignment:---GTCAAACAGG
CCTGTCAA-----
 A C G T A C G T A C G T T A C G C A G T G T A C C G T A G T C A G T C A A G T C G T C A T A C G A T C G
T A G C T G A C G A C T C T A G G A C T A T G C C G T A G C T A A C G T A C G T A C G T A C G T A C G T

MEIS1/MA0498.2/Jaspar

Match Rank:5
Score:0.61
Offset:-2
Orientation:reverse strand
Alignment:--GTCAAACAGG
NTGTCAN-----
 A C G T A C G T T A C G C A G T G T A C C G T A G T C A G T C A A G T C G T C A T A C G A T C G
G A T C G A C T C T A G A C G T A T G C C G T A C G T A A C G T A C G T A C G T A C G T A C G T

GRHL1/MA0647.1/Jaspar

Match Rank:6
Score:0.60
Offset:2
Orientation:forward strand
Alignment:GTCAAACAGG----
--AAAACCGGTTTT
 T A C G C A G T G T A C C G T A G T C A G T C A A G T C G T C A T A C G A T C G A C G T A C G T A C G T A C G T
A C G T A C G T G T C A C G T A C T G A C G T A A G T C G T A C C T A G A T C G G C A T G A C T G C A T C G A T

TFCP2/MA0145.3/Jaspar

Match Rank:7
Score:0.60
Offset:3
Orientation:forward strand
Alignment:GTCAAACAGG---
---AAACCGGTTT
 T A C G C A G T G T A C C G T A G T C A G T C A A G T C G T C A T A C G A T C G A C G T A C G T A C G T
A C G T A C G T A C G T T C G A C G T A C G T A T A G C G A T C C T A G A T C G G C A T G A C T G A C T

MEIS2/MA0774.1/Jaspar

Match Rank:8
Score:0.59
Offset:-3
Orientation:reverse strand
Alignment:---GTCAAACAGG
GCTGTCAA-----
 A C G T A C G T A C G T T A C G C A G T G T A C C G T A G T C A G T C A A G T C G T C A T A C G A T C G
A T C G A T G C A C G T C A T G G C A T A G T C G T C A G C T A A C G T A C G T A C G T A C G T A C G T

Nr2e1/MA0676.1/Jaspar

Match Rank:9
Score:0.59
Offset:-4
Orientation:forward strand
Alignment:----GTCAAACAGG
AAAAGTCAA-----
 A C G T A C G T A C G T A C G T T A C G C A G T G T A C C G T A G T C A G T C A A G T C G T C A T A C G A T C G
G C T A C T G A C T G A C T G A C T A G A G C T A G T C C G T A G C T A A C G T A C G T A C G T A C G T A C G T

Dux/MA0611.1/Jaspar

Match Rank:10
Score:0.59
Offset:1
Orientation:forward strand
Alignment:GTCAAACAGG
-CCAATCAA-
 T A C G C A G T G T A C C G T A G T C A G T C A A G T C G T C A T A C G A T C G
A C G T A T G C A G T C C G T A C G T A A C G T A G T C C G T A C G T A A C G T