Information for 6-GRTGWTGWCTTTG (Motif 7)

C T A G C T G A A C G T A C T G C G A T A C G T A C T G G C T A A G T C A G C T A C G T A C G T A C T G
Reverse Opposite:
G T A C C G T A C G T A C T G A T C A G C G A T A G T C G T C A C G T A A G T C C G T A A G C T A G T C
p-value:1e-12
log p-value:-2.808e+01
Information Content per bp:1.802
Number of Target Sequences with motif8.0
Percentage of Target Sequences with motif1.06%
Number of Background Sequences with motif7.8
Percentage of Background Sequences with motif0.02%
Average Position of motif in Targets45.3 +/- 17.0bp
Average Position of motif in Background42.5 +/- 12.0bp
Strand Bias (log2 ratio + to - strand density)0.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Nr2e1/MA0676.1/Jaspar

Match Rank:1
Score:0.64
Offset:4
Orientation:reverse strand
Alignment:GRTGWTGWCTTTG
----TTGACTTTT
 C T A G C T G A A C G T A C T G C G A T A C G T A C T G G C T A A G T C A G C T A C G T A C G T A C T G
A C G T A C G T A C G T A C G T C G A T A C G T T C A G C T G A G A T C G A C T G A C T G A C T C G A T

NF1:FOXA1(CTF,Forkhead)/LNCAP-FOXA1-ChIP-Seq(GSE27824)/Homer

Match Rank:2
Score:0.64
Offset:0
Orientation:forward strand
Alignment:GRTGWTGWCTTTG---
NNTGTTTATTTTGGCA
 C T A G C T G A A C G T A C T G C G A T A C G T A C T G G C T A A G T C A G C T A C G T A C G T A C T G A C G T A C G T A C G T
C G A T G A C T C G A T T C A G G A C T A C G T C A G T C T G A G A C T G A C T A G C T C G A T A C T G A T C G G T A C G C T A

PB0122.1_Foxk1_2/Jaspar

Match Rank:3
Score:0.62
Offset:-1
Orientation:reverse strand
Alignment:-GRTGWTGWCTTTG-
NNNTGTTGTTGTTNG
 A C G T C T A G C T G A A C G T A C T G C G A T A C G T A C T G G C T A A G T C A G C T A C G T A C G T A C T G A C G T
C T G A C A T G C T A G G C A T C T A G G C A T A C G T C T A G A G C T A C G T C T A G G A C T C A G T C G A T C A T G

JUN/MA0488.1/Jaspar

Match Rank:4
Score:0.61
Offset:-2
Orientation:forward strand
Alignment:--GRTGWTGWCTTTG
AAGATGATGTCAT--
 A C G T A C G T C T A G C T G A A C G T A C T G C G A T A C G T A C T G G C T A A G T C A G C T A C G T A C G T A C T G
C G T A C G T A C T A G T C G A A C G T A C T G C G T A A C G T A T C G G A C T G T A C C G T A A G C T A C G T A C G T

Foxa2/MA0047.2/Jaspar

Match Rank:5
Score:0.61
Offset:2
Orientation:forward strand
Alignment:GRTGWTGWCTTTG-
--TGTTTACTTAGG
 C T A G C T G A A C G T A C T G C G A T A C G T A C T G G C T A A G T C A G C T A C G T A C G T A C T G A C G T
A C G T A C G T A C G T C T A G A C G T A C G T A C G T T C G A A G T C G C A T A G C T C G T A C A T G A T C G

FOXA1(Forkhead)/LNCAP-FOXA1-ChIP-Seq(GSE27824)/Homer

Match Rank:6
Score:0.59
Offset:2
Orientation:reverse strand
Alignment:GRTGWTGWCTTTG
--TGTTTACTTT-
 C T A G C T G A A C G T A C T G C G A T A C G T A C T G G C T A A G T C A G C T A C G T A C G T A C T G
A C G T A C G T A C G T C T A G A C G T A C G T A C G T C T G A A G T C G C A T A G C T C G A T A C G T

FOXA1(Forkhead)/MCF7-FOXA1-ChIP-Seq(GSE26831)/Homer

Match Rank:7
Score:0.57
Offset:2
Orientation:reverse strand
Alignment:GRTGWTGWCTTTG
--TGTTTACTTT-
 C T A G C T G A A C G T A C T G C G A T A C G T A C T G G C T A A G T C A G C T A C G T A C G T A C T G
A C G T A C G T A C G T C T A G A C G T A C G T A C G T C T G A A G T C G C A T A G C T C G A T A C G T

Foxa3(Forkhead)/Liver-Foxa3-ChIP-Seq(GSE77670)/Homer

Match Rank:8
Score:0.57
Offset:-1
Orientation:forward strand
Alignment:-GRTGWTGWCTTTG-
BSNTGTTTACWYWGN
 A C G T C T A G C T G A A C G T A C T G C G A T A C G T A C T G G C T A A G T C A G C T A C G T A C G T A C T G A C G T
A G T C T A G C G A C T A C G T C T A G A C G T A C G T A C G T C T G A A G T C G C T A G A C T C G T A C T A G A C T G

JUND(var.2)/MA0492.1/Jaspar

Match Rank:9
Score:0.57
Offset:-3
Orientation:forward strand
Alignment:---GRTGWTGWCTTTG
AAAGATGATGTCATC-
 A C G T A C G T A C G T C T A G C T G A A C G T A C T G C G A T A C G T A C T G G C T A A G T C A G C T A C G T A C G T A C T G
C G T A C T G A C G T A T C A G T C G A A C G T A C T G C G T A A G C T T C A G A G C T T G A C C G T A A G C T T G A C A C G T

FOXA1/MA0148.3/Jaspar

Match Rank:10
Score:0.57
Offset:-2
Orientation:forward strand
Alignment:--GRTGWTGWCTTTG
TCCATGTTTACTTTG
 A C G T A C G T C T A G C T G A A C G T A C T G C G A T A C G T A C T G G C T A A G T C A G C T A C G T A C G T A C T G
G A C T A G T C A T G C G C T A C G A T C T A G A C G T A C G T A C G T C T G A A G T C G C A T A G C T C G A T C A T G