Information for 9-GCTGTGGGGATTG (Motif 12)

A T C G A G T C A C G T A C T G A C G T A T C G C T A G A C T G A C T G C G T A A C G T A C G T A C T G
Reverse Opposite:
A G T C C G T A C G T A A C G T A G T C A G T C A G T C A T G C C G T A G T A C C G T A A C T G A T G C
p-value:1e-11
log p-value:-2.538e+01
Information Content per bp:1.933
Number of Target Sequences with motif5.0
Percentage of Target Sequences with motif0.66%
Number of Background Sequences with motif0.5
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets48.6 +/- 28.7bp
Average Position of motif in Background43.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)0.6
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

FOXH1/MA0479.1/Jaspar

Match Rank:1
Score:0.66
Offset:4
Orientation:reverse strand
Alignment:GCTGTGGGGATTG--
----TGTGGATTNNN
 A T C G A G T C A C G T A C T G A C G T A T C G C T A G A C T G A C T G C G T A A C G T A C G T A C T G A C G T A C G T
A C G T A C G T A C G T A C G T C G A T A C T G A C G T A C T G C A T G C G T A G C A T A C G T A T C G T C A G T C G A

Foxh1(Forkhead)/hESC-FOXH1-ChIP-Seq(GSE29422)/Homer

Match Rank:2
Score:0.64
Offset:2
Orientation:forward strand
Alignment:GCTGTGGGGATTG-
--NNTGTGGATTSS
 A T C G A G T C A C G T A C T G A C G T A T C G C T A G A C T G A C T G C G T A A C G T A C G T A C T G A C G T
A C G T A C G T C A T G G A C T G C A T A C T G A G C T A C T G A C T G C G T A G C A T A G C T A T C G T A C G

PH0015.1_Crx/Jaspar

Match Rank:3
Score:0.64
Offset:1
Orientation:forward strand
Alignment:GCTGTGGGGATTG----
-CGTTGGGGATTAGCCT
 A T C G A G T C A C G T A C T G A C G T A T C G C T A G A C T G A C T G C G T A A C G T A C G T A C T G A C G T A C G T A C G T A C G T
A C G T A G T C A C T G C G A T C G A T T A C G T A C G C T A G A C T G G T C A A C G T C G A T C G T A C T A G A G T C A T G C C A G T

MZF1/MA0056.1/Jaspar

Match Rank:4
Score:0.63
Offset:4
Orientation:forward strand
Alignment:GCTGTGGGGATTG
----TGGGGA---
 A T C G A G T C A C G T A C T G A C G T A T C G C T A G A C T G A C T G C G T A A C G T A C G T A C T G
A C G T A C G T A C G T A C G T A G C T A C T G C T A G A C T G A C T G C T G A A C G T A C G T A C G T

PH0129.1_Otx1/Jaspar

Match Rank:5
Score:0.61
Offset:2
Orientation:forward strand
Alignment:GCTGTGGGGATTG------
--AGAGGGGATTAATTTAT
 A T C G A G T C A C G T A C T G A C G T A T C G C T A G A C T G A C T G C G T A A C G T A C G T A C T G A C G T A C G T A C G T A C G T A C G T A C G T
A C G T A C G T C T A G C A T G C G T A C T A G T A C G C T A G C A T G G T C A A C G T C G A T C G T A C G T A G A C T G C A T G A C T G C T A A G C T

POL009.1_DCE_S_II/Jaspar

Match Rank:6
Score:0.61
Offset:0
Orientation:forward strand
Alignment:GCTGTGGGGATTG
GCTGTG-------
 A T C G A G T C A C G T A C T G A C G T A T C G C T A G A C T G A C T G C G T A A C G T A C G T A C T G
T A C G T A G C C A G T A T C G G A C T A T C G A C G T A C G T A C G T A C G T A C G T A C G T A C G T

PH0130.1_Otx2/Jaspar

Match Rank:7
Score:0.58
Offset:2
Orientation:forward strand
Alignment:GCTGTGGGGATTG------
--TGTAGGGATTAATTGTC
 A T C G A G T C A C G T A C T G A C G T A T C G C T A G A C T G A C T G C G T A A C G T A C G T A C T G A C G T A C G T A C G T A C G T A C G T A C G T
A C G T A C G T C A G T C T A G C G A T T C G A T C A G T C A G C A T G G T C A C G A T C G A T C G T A C T G A A G C T G A C T C T A G C A G T G A T C

PH0139.1_Pitx3/Jaspar

Match Rank:8
Score:0.57
Offset:3
Orientation:forward strand
Alignment:GCTGTGGGGATTG------
---AGGGGGATTAGCTGCC
 A T C G A G T C A C G T A C T G A C G T A T C G C T A G A C T G A C T G C G T A A C G T A C G T A C T G A C G T A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T T C G A C T A G T A C G C T A G C T A G A C T G G T C A A G C T G A C T C G T A C A T G A T G C A C G T C T A G A T G C A T G C

PH0137.1_Pitx1/Jaspar

Match Rank:9
Score:0.57
Offset:1
Orientation:forward strand
Alignment:GCTGTGGGGATTG-----
-TTAGAGGGATTAACAAT
 A T C G A G T C A C G T A C T G A C G T A T C G C T A G A C T G A C T G C G T A A C G T A C G T A C T G A C G T A C G T A C G T A C G T A C G T
A C G T G A C T A C G T T C G A C T A G C T G A T C A G C T A G C A T G G T C A A C G T G A C T C G T A C T G A G T A C C T G A G T C A G C A T

PH0138.1_Pitx2/Jaspar

Match Rank:10
Score:0.57
Offset:2
Orientation:forward strand
Alignment:GCTGTGGGGATTG------
--TGAAGGGATTAATCATC
 A T C G A G T C A C G T A C T G A C G T A T C G C T A G A C T G A C T G C G T A A C G T A C G T A C T G A C G T A C G T A C G T A C G T A C G T A C G T
A C G T A C G T C A G T C A T G C G T A T C G A T C A G C T A G C A T G G T C A A G C T G A C T C G T A C T G A A G C T G A T C C T G A C G A T G A T C