Information for 4-TGATGTTCTT (Motif 9)

G C A T C T A G T C G A G C A T T A C G G C A T G C A T G A T C G C A T C A G T
Reverse Opposite:
G T C A C G T A C T A G C G T A C G T A A T G C C G T A A G C T G A T C C G T A
p-value:1e-10
log p-value:-2.430e+01
Information Content per bp:1.655
Number of Target Sequences with motif89.0
Percentage of Target Sequences with motif11.60%
Number of Background Sequences with motif2483.4
Percentage of Background Sequences with motif5.44%
Average Position of motif in Targets51.8 +/- 27.3bp
Average Position of motif in Background50.3 +/- 30.8bp
Strand Bias (log2 ratio + to - strand density)0.1
Multiplicity (# of sites on avg that occur together)1.08
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0122.1_Foxk1_2/Jaspar

Match Rank:1
Score:0.66
Offset:-3
Orientation:reverse strand
Alignment:---TGATGTTCTT--
NNNTGTTGTTGTTNG
 A C G T A C G T A C G T G C A T C T A G T C G A G C A T T A C G G C A T G C A T G A T C G C A T C A G T A C G T A C G T
C T G A C A T G C T A G G C A T C T A G G C A T A C G T C T A G A G C T A C G T C T A G G A C T C A G T C G A T C A T G

AR-halfsite(NR)/LNCaP-AR-ChIP-Seq(GSE27824)/Homer

Match Rank:2
Score:0.64
Offset:2
Orientation:reverse strand
Alignment:TGATGTTCTT--
--CTGTTCCTGG
 G C A T C T A G T C G A G C A T T A C G G C A T G C A T G A T C G C A T C A G T A C G T A C G T
A C G T A C G T T A G C C G A T A T C G A C G T A C G T A G T C A G T C G C A T C A T G A T C G

PB0120.1_Foxj1_2/Jaspar

Match Rank:3
Score:0.62
Offset:-1
Orientation:reverse strand
Alignment:-TGATGTTCTT----
GTNTTGTTGTGANNT
 A C G T G C A T C T A G T C G A G C A T T A C G G C A T G C A T G A T C G C A T C A G T A C G T A C G T A C G T A C G T
C A T G A G C T T A C G G A C T G C A T A C T G A C G T G A C T C T A G A G C T A C T G T G C A A G T C T C G A C G A T

PB0141.1_Isgf3g_2/Jaspar

Match Rank:4
Score:0.62
Offset:-3
Orientation:reverse strand
Alignment:---TGATGTTCTT-
NNGTANTGTTTTNC
 A C G T A C G T A C G T G C A T C T A G T C G A G C A T T A C G G C A T G C A T G A T C G C A T C A G T A C G T
G A C T C T G A C A T G C G A T G T C A T G C A G C A T A T C G G A C T G C A T G C A T G C A T A T C G T G A C

PB0093.1_Zfp105_1/Jaspar

Match Rank:5
Score:0.61
Offset:-1
Orientation:reverse strand
Alignment:-TGATGTTCTT----
NTNTTGTTGTTTGTN
 A C G T G C A T C T A G T C G A G C A T T A C G G C A T G C A T G A T C G C A T C A G T A C G T A C G T A C G T A C G T
G A T C C G A T G T A C C G A T G A C T C A T G G C A T A G C T C T A G C G A T C G A T C A G T C T A G G A C T C G A T

SD0003.1_at_AC_acceptor/Jaspar

Match Rank:6
Score:0.60
Offset:-1
Orientation:forward strand
Alignment:-TGATGTTCTT
AAGATATCCTT
 A C G T G C A T C T A G T C G A G C A T T A C G G C A T G C A T G A T C G C A T C A G T
G C T A G C T A T C A G C G T A A C G T C T G A C G A T A T G C G A T C G C A T A G C T

PGR(NR)/EndoStromal-PGR-ChIP-Seq(GSE69539)/Homer

Match Rank:7
Score:0.60
Offset:-5
Orientation:reverse strand
Alignment:-----TGATGTTCTT
GAACADWATGTTCTT
 A C G T A C G T A C G T A C G T A C G T G C A T C T A G T C G A G C A T T A C G G C A T G C A T G A T C G C A T C A G T
C T A G C G T A C G T A A G T C C G T A C A G T C G T A G T C A C G A T A C T G A C G T G C A T A G T C G A C T G C A T

JUN/MA0488.1/Jaspar

Match Rank:8
Score:0.59
Offset:-4
Orientation:forward strand
Alignment:----TGATGTTCTT
AAGATGATGTCAT-
 A C G T A C G T A C G T A C G T G C A T C T A G T C G A G C A T T A C G G C A T G C A T G A T C G C A T C A G T
C G T A C G T A C T A G T C G A A C G T A C T G C G T A A C G T A T C G G A C T G T A C C G T A A G C T A C G T

PB0090.1_Zbtb12_1/Jaspar

Match Rank:9
Score:0.58
Offset:-1
Orientation:forward strand
Alignment:-TGATGTTCTT------
CTAAGGTTCTAGATCAC
 A C G T G C A T C T A G T C G A G C A T T A C G G C A T G C A T G A T C G C A T C A G T A C G T A C G T A C G T A C G T A C G T A C G T
A T G C A C G T G C T A T C G A A C T G C T A G C G A T C G A T A G T C A G C T T C G A C T A G T C G A G C A T A G T C T G C A A G T C

PB0208.1_Zscan4_2/Jaspar

Match Rank:10
Score:0.58
Offset:-4
Orientation:reverse strand
Alignment:----TGATGTTCTT--
NNNNTTGTGTGCTTNN
 A C G T A C G T A C G T A C G T G C A T C T A G T C G A G C A T T A C G G C A T G C A T G A T C G C A T C A G T A C G T A C G T
A G C T C G T A C G A T C A G T C A G T C G A T C T A G A G C T A C T G C G A T A C T G A G T C A G C T C G A T A T G C C A T G