p-value: | 1e-10 |
log p-value: | -2.525e+01 |
Information Content per bp: | 1.918 |
Number of Target Sequences with motif | 5.0 |
Percentage of Target Sequences with motif | 0.65% |
Number of Background Sequences with motif | 1.9 |
Percentage of Background Sequences with motif | 0.00% |
Average Position of motif in Targets | 67.6 +/- 17.9bp |
Average Position of motif in Background | 0.0 +/- 0.0bp |
Strand Bias (log2 ratio + to - strand density) | -0.6 |
Multiplicity (# of sites on avg that occur together) | 1.00 |
Motif File: | file (matrix) reverse opposite |
SVG Files for Logos: | forward logo reverse opposite |
PR(NR)/T47D-PR-ChIP-Seq(GSE31130)/Homer
Match Rank: | 1 |
Score: | 0.62 |
Offset: | 0 |
Orientation: | forward strand |
Alignment: | GAGTACAGACAGTACA VAGRACAKNCTGTBC- |
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GRE(NR),IR3/RAW264.7-GRE-ChIP-Seq(Unpublished)/Homer
Match Rank: | 2 |
Score: | 0.61 |
Offset: | 0 |
Orientation: | forward strand |
Alignment: | GAGTACAGACAGTACA VAGRACAKWCTGTYC- |
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PB0060.1_Smad3_1/Jaspar
Match Rank: | 3 |
Score: | 0.61 |
Offset: | -1 |
Orientation: | forward strand |
Alignment: | -GAGTACAGACAGTACA CAAATCCAGACATCACA |
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GRE(NR),IR3/A549-GR-ChIP-Seq(GSE32465)/Homer
Match Rank: | 4 |
Score: | 0.60 |
Offset: | 0 |
Orientation: | forward strand |
Alignment: | GAGTACAGACAGTACA NAGNACANNNTGTNCT |
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ARE(NR)/LNCAP-AR-ChIP-Seq(GSE27824)/Homer
Match Rank: | 5 |
Score: | 0.59 |
Offset: | 0 |
Orientation: | reverse strand |
Alignment: | GAGTACAGACAGTACA NAGAACAGNCTGTNCT |
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Vdr/MA0693.1/Jaspar
Match Rank: | 6 |
Score: | 0.59 |
Offset: | 0 |
Orientation: | forward strand |
Alignment: | GAGTACAGACAGTACA GAGTTCATTGAGTTCA |
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PGR(NR)/EndoStromal-PGR-ChIP-Seq(GSE69539)/Homer
Match Rank: | 7 |
Score: | 0.58 |
Offset: | 0 |
Orientation: | forward strand |
Alignment: | GAGTACAGACAGTACA AAGAACATWHTGTTC- |
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VDR(NR),DR3/GM10855-VDR+vitD-ChIP-Seq(GSE22484)/Homer
Match Rank: | 8 |
Score: | 0.55 |
Offset: | -1 |
Orientation: | forward strand |
Alignment: | -GAGTACAGACAGTACA--- NGAGGTCANNGAGTTCANNN |
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Smad2(MAD)/ES-SMAD2-ChIP-Seq(GSE29422)/Homer
Match Rank: | 9 |
Score: | 0.54 |
Offset: | 4 |
Orientation: | reverse strand |
Alignment: | GAGTACAGACAGTACA ----CCAGACAG---- |
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NR3C1/MA0113.3/Jaspar
Match Rank: | 10 |
Score: | 0.54 |
Offset: | 0 |
Orientation: | forward strand |
Alignment: | GAGTACAGACAGTACA- GGGTACATAATGTTCCC |
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