Information for 3-WGAWCAGHRAGYRCAC (Motif 4)

C G A T A T C G C T G A G C A T G T A C G T C A A T C G G A C T C T G A G T C A C T A G G A C T C T A G G T A C G T C A G T A C
Reverse Opposite:
A C T G A C G T C A T G G A T C C T G A G A T C A C G T A G C T C T A G A T G C C A G T A C T G C G T A G A C T A T G C G C T A
p-value:1e-13
log p-value:-3.150e+01
Information Content per bp:1.622
Number of Target Sequences with motif14.0
Percentage of Target Sequences with motif1.83%
Number of Background Sequences with motif40.9
Percentage of Background Sequences with motif0.09%
Average Position of motif in Targets34.9 +/- 22.7bp
Average Position of motif in Background45.4 +/- 29.8bp
Strand Bias (log2 ratio + to - strand density)-0.2
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

VDR(NR),DR3/GM10855-VDR+vitD-ChIP-Seq(GSE22484)/Homer

Match Rank:1
Score:0.62
Offset:-2
Orientation:forward strand
Alignment:--WGAWCAGHRAGYRCAC--
NGAGGTCANNGAGTTCANNN
 A C G T A C G T C G A T A T C G C T G A G C A T G T A C G T C A A T C G G A C T C T G A G T C A C T A G G A C T C T A G G T A C G T C A G T A C A C G T A C G T
C T G A T C A G C T G A C T A G C A T G A C G T A T G C C G T A A T G C G C A T T C A G C T G A A C T G A C G T C A G T A G T C C G T A C A G T C T A G C A T G

Vdr/MA0693.1/Jaspar

Match Rank:2
Score:0.57
Offset:-1
Orientation:forward strand
Alignment:-WGAWCAGHRAGYRCAC
GAGTTCATTGAGTTCA-
 A C G T C G A T A T C G C T G A G C A T G T A C G T C A A T C G G A C T C T G A G T C A C T A G G A C T C T A G G T A C G T C A G T A C
T C A G T C G A C A T G A C G T A C G T A G T C C T G A G A C T G A C T T C A G T C G A C T A G A C G T A C G T A G T C C T G A A C G T

ELF3(ETS)/PDAC-ELF3-ChIP-Seq(GSE64557)/Homer

Match Rank:3
Score:0.55
Offset:2
Orientation:forward strand
Alignment:WGAWCAGHRAGYRCAC
--ANCAGGAAGT----
 C G A T A T C G C T G A G C A T G T A C G T C A A T C G G A C T C T G A G T C A C T A G G A C T C T A G G T A C G T C A G T A C
A C G T A C G T C G T A T G A C T A G C T G C A A C T G A C T G C G T A C G T A T C A G G A C T A C G T A C G T A C G T A C G T

RXRA::VDR/MA0074.1/Jaspar

Match Rank:4
Score:0.54
Offset:0
Orientation:forward strand
Alignment:WGAWCAGHRAGYRCAC
GGGTCAACGAGTTCA-
 C G A T A T C G C T G A G C A T G T A C G T C A A T C G G A C T C T G A G T C A C T A G G A C T C T A G G T A C G T C A G T A C
C T A G A C T G A C T G A C G T A G T C C T G A G C A T A G T C C T A G C T A G A C T G A C G T C G A T A G T C T C G A A C G T

NR4A2/MA0160.1/Jaspar

Match Rank:5
Score:0.54
Offset:8
Orientation:forward strand
Alignment:WGAWCAGHRAGYRCAC
--------AAGGTCAC
 C G A T A T C G C T G A G C A T G T A C G T C A A T C G G A C T C T G A G T C A C T A G G A C T C T A G G T A C G T C A G T A C
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T C T G A C T G A A C T G C T A G G A C T A G T C C G T A T G A C

ERG(ETS)/VCaP-ERG-ChIP-Seq(GSE14097)/Homer

Match Rank:6
Score:0.53
Offset:3
Orientation:forward strand
Alignment:WGAWCAGHRAGYRCAC
---ACAGGAAGTG---
 C G A T A T C G C T G A G C A T G T A C G T C A A T C G G A C T C T G A G T C A C T A G G A C T C T A G G T A C G T C A G T A C
A C G T A C G T A C G T T C G A T A G C G T C A A C T G A C T G C G T A C G T A C T A G A G C T T C A G A C G T A C G T A C G T

Ets1-distal(ETS)/CD4+-PolII-ChIP-Seq(Barski_et_al.)/Homer

Match Rank:7
Score:0.52
Offset:2
Orientation:forward strand
Alignment:WGAWCAGHRAGYRCAC
--AACAGGAAGT----
 C G A T A T C G C T G A G C A T G T A C G T C A A T C G G A C T C T G A G T C A C T A G G A C T C T A G G T A C G T C A G T A C
A C G T A C G T T G C A C T G A A T G C G T C A A C T G A C T G C G T A C G T A C T A G A G C T A C G T A C G T A C G T A C G T

EHF(ETS)/LoVo-EHF-ChIP-Seq(GSE49402)/Homer

Match Rank:8
Score:0.52
Offset:2
Orientation:forward strand
Alignment:WGAWCAGHRAGYRCAC
--AVCAGGAAGT----
 C G A T A T C G C T G A G C A T G T A C G T C A A T C G G A C T C T G A G T C A C T A G G A C T C T A G G T A C G T C A G T A C
A C G T A C G T C G T A T A G C T A G C T G C A A C T G C T A G C G T A C G T A T C A G G A C T A C G T A C G T A C G T A C G T

EWS:FLI1-fusion(ETS)/SK_N_MC-EWS:FLI1-ChIP-Seq(SRA014231)/Homer

Match Rank:9
Score:0.51
Offset:2
Orientation:forward strand
Alignment:WGAWCAGHRAGYRCAC
--NACAGGAAAT----
 C G A T A T C G C T G A G C A T G T A C G T C A A T C G G A C T C T G A G T C A C T A G G A C T C T A G G T A C G T C A G T A C
A C G T A C G T T G C A C T G A A G T C G T C A A C T G A C T G C G T A C G T A C T G A A G C T A C G T A C G T A C G T A C G T

ELF5(ETS)/T47D-ELF5-ChIP-Seq(GSE30407)/Homer

Match Rank:10
Score:0.51
Offset:2
Orientation:forward strand
Alignment:WGAWCAGHRAGYRCAC
--ACVAGGAAGT----
 C G A T A T C G C T G A G C A T G T A C G T C A A T C G G A C T C T G A G T C A C T A G G A C T C T A G G T A C G T C A G T A C
A C G T A C G T G C T A A G T C T A C G T G C A A T C G T C A G G C T A T C G A T C A G A G C T A C G T A C G T A C G T A C G T