Information for 3-TGCCACCTWGTGG (Motif 3)

G A C T T A C G A G T C A G T C G T C A A G T C A G T C G C A T C G A T A C T G A G C T A C T G C T A G
Reverse Opposite:
A G T C A G T C C T G A A G T C G C T A C G T A C T A G C T A G A C G T A C T G A C T G A G T C C T G A
p-value:1e-15
log p-value:-3.522e+01
Information Content per bp:1.778
Number of Target Sequences with motif9.0
Percentage of Target Sequences with motif1.17%
Number of Background Sequences with motif5.1
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets54.2 +/- 25.1bp
Average Position of motif in Background48.1 +/- 7.8bp
Strand Bias (log2 ratio + to - strand density)1.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

CTCF(Zf)/CD4+-CTCF-ChIP-Seq(Barski_et_al.)/Homer

Match Rank:1
Score:0.88
Offset:-4
Orientation:forward strand
Alignment:----TGCCACCTWGTGG---
ANAGTGCCACCTGGTGGCCA
 A C G T A C G T A C G T A C G T G A C T T A C G A G T C A G T C G T C A A G T C A G T C G C A T C G A T A C T G A G C T A C T G C T A G A C G T A C G T A C G T
T G C A A G C T C T G A A T C G G A C T C T A G G T A C G A T C G T C A A G T C G T A C G A C T C T A G A T C G G C A T C A T G C A T G G A T C G T A C C T G A

CTCF/MA0139.1/Jaspar

Match Rank:2
Score:0.85
Offset:-3
Orientation:reverse strand
Alignment:---TGCCACCTWGTGG---
TAGCGCCCCCTGGTGGCCA
 A C G T A C G T A C G T G A C T T A C G A G T C A G T C G T C A A G T C A G T C G C A T C G A T A C T G A G C T A C T G C T A G A C G T A C G T A C G T
A G C T C T G A A T C G G A T C C A T G G T A C G A T C G T A C G A T C G A T C G A C T C T A G A T C G G C A T C A T G C A T G G A T C G T A C C T G A

BORIS(Zf)/K562-CTCFL-ChIP-Seq(GSE32465)/Homer

Match Rank:3
Score:0.83
Offset:-6
Orientation:forward strand
Alignment:------TGCCACCTWGTGG-
CNNBRGCGCCCCCTGSTGGC
 A C G T A C G T A C G T A C G T A C G T A C G T G A C T T A C G A G T C A G T C G T C A A G T C A G T C G C A T C G A T A C T G A G C T A C T G C T A G A C G T
T A G C A G T C T G A C A G T C C T A G A T C G A G T C C A T G T G A C A G T C G T A C A G T C A G T C G C A T C T A G A T C G G C A T A C T G A T C G G A T C

YY1/MA0095.2/Jaspar

Match Rank:4
Score:0.62
Offset:-2
Orientation:reverse strand
Alignment:--TGCCACCTWGTGG
GCNGCCATCTTG---
 A C G T A C G T G A C T T A C G A G T C A G T C G T C A A G T C A G T C G C A T C G A T A C T G A G C T A C T G C T A G
C A T G A G T C T G A C C A T G A G T C A G T C C T G A A C G T A G T C A G C T G A C T A C T G A C G T A C G T A C G T

NeuroD1(bHLH)/Islet-NeuroD1-ChIP-Seq(GSE30298)/Homer

Match Rank:5
Score:0.61
Offset:1
Orientation:forward strand
Alignment:TGCCACCTWGTGG
-GCCATCTGTT--
 G A C T T A C G A G T C A G T C G T C A A G T C A G T C G C A T C G A T A C T G A G C T A C T G C T A G
A C G T T C A G T G A C G T A C C G T A A C G T T G A C A C G T T C A G A G C T G A C T A C G T A C G T

Hic1/MA0739.1/Jaspar

Match Rank:6
Score:0.61
Offset:-1
Orientation:forward strand
Alignment:-TGCCACCTWGTGG
ATGCCAACC-----
 A C G T G A C T T A C G A G T C A G T C G T C A A G T C A G T C G C A T C G A T A C T G A G C T A C T G C T A G
T C G A A G C T T C A G T A G C G T A C G T C A T C G A A T G C A G T C A C G T A C G T A C G T A C G T A C G T

YY1(Zf)/Promoter/Homer

Match Rank:7
Score:0.60
Offset:-2
Orientation:reverse strand
Alignment:--TGCCACCTWGTGG
GCCGCCATCTTG---
 A C G T A C G T G A C T T A C G A G T C A G T C G T C A A G T C A G T C G C A T C G A T A C T G A G C T A C T G C T A G
C A T G G A T C A T G C C T A G A G T C A G T C C G T A A C G T A T G C A G C T A C G T A T C G A C G T A C G T A C G T

ZNF354C/MA0130.1/Jaspar

Match Rank:8
Score:0.59
Offset:9
Orientation:reverse strand
Alignment:TGCCACCTWGTGG--
---------GTGGAT
 G A C T T A C G A G T C A G T C G T C A A G T C A G T C G C A T C G A T A C T G A G C T A C T G C T A G A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A T C G A C G T A C T G A C T G C G T A A C G T

Tbx5(T-box)/HL1-Tbx5.biotin-ChIP-Seq(GSE21529)/Homer

Match Rank:9
Score:0.58
Offset:0
Orientation:reverse strand
Alignment:TGCCACCTWGTGG
TGACACCT-----
 G A C T T A C G A G T C A G T C G T C A A G T C A G T C G C A T C G A T A C T G A G C T A C T G C T A G
G A C T T C A G C T G A A G T C C T G A T A G C G A T C G A C T A C G T A C G T A C G T A C G T A C G T

PB0101.1_Zic1_1/Jaspar

Match Rank:10
Score:0.57
Offset:1
Orientation:reverse strand
Alignment:TGCCACCTWGTGG--
-CCCCCCCGGGGGNN
 G A C T T A C G A G T C A G T C G T C A A G T C A G T C G C A T C G A T A C T G A G C T A C T G C T A G A C G T A C G T
A C G T T A G C T G A C G A T C G T A C G T A C A T G C T A G C A T C G T A C G A C T G A C T G C A T G C A G T T A C G