Information for 16-GTGCMTCTKYGYA (Motif 15)

A C T G A C G T A C T G A G T C G T A C A C G T A G T C A C G T A C T G A G T C C T A G A G C T C G T A
Reverse Opposite:
A C G T C T G A A G T C C T A G G T A C C G T A A C T G C G T A A C T G A C T G A G T C C G T A A G T C
p-value:1e-3
log p-value:-7.504e+00
Information Content per bp:1.878
Number of Target Sequences with motif2.0
Percentage of Target Sequences with motif0.26%
Number of Background Sequences with motif3.0
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets48.2 +/- 25.2bp
Average Position of motif in Background47.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)2.0
Multiplicity (# of sites on avg that occur together)2.50
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

NHLH1/MA0048.2/Jaspar

Match Rank:1
Score:0.53
Offset:1
Orientation:reverse strand
Alignment:GTGCMTCTKYGYA
-CGCAGCTGCG--
 A C T G A C G T A C T G A G T C G T A C A C G T A G T C A C G T A C T G A G T C C T A G A G C T C G T A
A C G T T G A C C T A G A T G C T C G A A T C G T A G C A C G T A C T G A G T C A C T G A C G T A C G T

PB0208.1_Zscan4_2/Jaspar

Match Rank:2
Score:0.52
Offset:-8
Orientation:reverse strand
Alignment:--------GTGCMTCTKYGYA
NNNNTTGTGTGCTTNN-----
 A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C T G A C G T A C T G A G T C G T A C A C G T A G T C A C G T A C T G A G T C C T A G A G C T C G T A
A G C T C G T A C G A T C A G T C A G T C G A T C T A G A G C T A C T G C G A T A C T G A G T C A G C T C G A T A T G C C A T G A C G T A C G T A C G T A C G T A C G T

PB0089.1_Tcfe2a_1/Jaspar

Match Rank:3
Score:0.51
Offset:-3
Orientation:reverse strand
Alignment:---GTGCMTCTKYGYA-
NNTNCGCACCTGTNGAN
 A C G T A C G T A C G T A C T G A C G T A C T G A G T C G T A C A C G T A G T C A C G T A C T G A G T C C T A G A G C T C G T A A C G T
G C A T C A G T G C A T A G C T G A T C T C A G G T A C C T G A A T G C T A G C A C G T A C T G A C G T C A T G C A T G G T C A A G C T

Ascl1(bHLH)/NeuralTubes-Ascl1-ChIP-Seq(GSE55840)/Homer

Match Rank:4
Score:0.51
Offset:1
Orientation:reverse strand
Alignment:GTGCMTCTKYGYA
-NVCAGCTGBBNN
 A C T G A C G T A C T G A G T C G T A C A C G T A G T C A C G T A C T G A G T C C T A G A G C T C G T A
A C G T T C G A T A C G G T A C C G T A A T C G T G A C C G A T A C T G A T G C A T G C T C A G G A T C

PB0130.1_Gm397_2/Jaspar

Match Rank:5
Score:0.50
Offset:-8
Orientation:reverse strand
Alignment:--------GTGCMTCTKYGYA
NNGCGTGTGTGCNGCN-----
 A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C T G A C G T A C T G A G T C G T A C A C G T A G T C A C G T A C T G A G T C C T A G A G C T C G T A
C A G T A C G T C T A G T G A C C A T G A C G T T A C G A G C T C A T G A G C T A C T G A G T C A G T C C A T G A G T C G A C T A C G T A C G T A C G T A C G T A C G T

HIF-1b(HLH)/T47D-HIF1b-ChIP-Seq(GSE59937)/Homer

Match Rank:6
Score:0.49
Offset:-4
Orientation:forward strand
Alignment:----GTGCMTCTKYGYA
RTACGTGC---------
 A C G T A C G T A C G T A C G T A C T G A C G T A C T G A G T C G T A C A C G T A G T C A C G T A C T G A G T C C T A G A G C T C G T A
C T G A C A G T C T G A A G T C C T A G G A C T A T C G G T A C A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

Atf4(bZIP)/MEF-Atf4-ChIP-Seq(GSE35681)/Homer

Match Rank:7
Score:0.49
Offset:-1
Orientation:reverse strand
Alignment:-GTGCMTCTKYGYA
ATTGCATCAK----
 A C G T A C T G A C G T A C T G A G T C G T A C A C G T A G T C A C G T A C T G A G T C C T A G A G C T C G T A
T C G A A C G T A C G T C T A G A G T C T C G A G C A T G T A C C T G A A C G T A C G T A C G T A C G T A C G T

NeuroG2(bHLH)/Fibroblast-NeuroG2-ChIP-Seq(GSE75910)/Homer

Match Rank:8
Score:0.49
Offset:1
Orientation:forward strand
Alignment:GTGCMTCTKYGYA
-ACCATCTGTT--
 A C T G A C G T A C T G A G T C G T A C A C G T A G T C A C G T A C T G A G T C C T A G A G C T C G T A
A C G T T C G A T G A C G T A C C G T A C A G T T G A C A C G T A C T G A G C T A G C T A C G T A C G T

TCF4/MA0830.1/Jaspar

Match Rank:9
Score:0.48
Offset:1
Orientation:forward strand
Alignment:GTGCMTCTKYGYA
-CGCACCTGCT--
 A C T G A C G T A C T G A G T C G T A C A C G T A G T C A C G T A C T G A G T C C T A G A G C T C G T A
A C G T G A T C T C A G G A T C C G T A A T G C T A G C C G A T C T A G A T G C C G A T A C G T A C G T

E2A(bHLH)/proBcell-E2A-ChIP-Seq(GSE21978)/Homer

Match Rank:10
Score:0.48
Offset:2
Orientation:reverse strand
Alignment:GTGCMTCTKYGYA
--GCAGCTGTNN-
 A C T G A C G T A C T G A G T C G T A C A C G T A G T C A C G T A C T G A G T C C T A G A G C T C G T A
A C G T A C G T T C A G A G T C C G T A A T C G T A G C A C G T A C T G A G C T A C T G G C A T A C G T