Information for 4-ATGTGTVHCTAAGATB (Motif 7)

G C T A A G C T A C T G A C G T A T C G A C G T T C G A G A T C A T G C A C G T C G T A C G T A A C T G G T C A A C G T A G T C
Reverse Opposite:
T A C G C G T A A C G T A G T C A C G T A C G T C G T A A T C G C A T G A C G T C G T A A T G C C G T A G T A C T C G A C G A T
p-value:1e-10
log p-value:-2.530e+01
Information Content per bp:1.769
Number of Target Sequences with motif5.0
Percentage of Target Sequences with motif0.65%
Number of Background Sequences with motif1.7
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets41.8 +/- 25.5bp
Average Position of motif in Background39.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0159.1_Rfx4_2/Jaspar

Match Rank:1
Score:0.55
Offset:1
Orientation:reverse strand
Alignment:ATGTGTVHCTAAGATB
-NNNGTAACTANGNNA
 G C T A A G C T A C T G A C G T A T C G A C G T T C G A G A T C A T G C A C G T C G T A C G T A A C T G G T C A A C G T A G T C
A C G T A C G T A T G C A T C G A C T G G A C T G T C A C G T A G T A C A G C T G C T A C A T G A T C G T A C G C A G T C G T A

Nr2e3/MA0164.1/Jaspar

Match Rank:2
Score:0.55
Offset:10
Orientation:reverse strand
Alignment:ATGTGTVHCTAAGATB-
----------AAGCTTG
 G C T A A G C T A C T G A C G T A T C G A C G T T C G A G A T C A T G C A C G T C G T A C G T A A C T G G T C A A C G T A G T C A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T C G T A C G T A A C T G A T G C A C G T A C G T C T A G

PRDM14(Zf)/H1-PRDM14-ChIP-Seq(GSE22767)/Homer

Match Rank:3
Score:0.50
Offset:2
Orientation:forward strand
Alignment:ATGTGTVHCTAAGATB
--AGGTCTCTAACC--
 G C T A A G C T A C T G A C G T A T C G A C G T T C G A G A T C A T G C A C G T C G T A C G T A A C T G G T C A A C G T A G T C
A C G T A C G T C T G A T C A G A C T G C A G T A G T C G A C T A G T C A C G T C G T A G C T A A T G C G A T C A C G T A C G T

PB0158.1_Rfx3_2/Jaspar

Match Rank:4
Score:0.50
Offset:-3
Orientation:reverse strand
Alignment:---ATGTGTVHCTAAGATB----
NNTNGNNGTAACCAAGNNNNAGN
 A C G T A C G T A C G T G C T A A G C T A C T G A C G T A T C G A C G T T C G A G A T C A T G C A C G T C G T A C G T A A C T G G T C A A C G T A G T C A C G T A C G T A C G T A C G T
T A G C G C A T A G C T A G C T A C T G A G C T A C T G C A T G G A C T G T C A G C T A T A G C A G T C C G T A C G T A T A C G A T C G T A C G C G A T T A G C T G C A C T A G A C G T

NFIL3/MA0025.1/Jaspar

Match Rank:5
Score:0.49
Offset:4
Orientation:forward strand
Alignment:ATGTGTVHCTAAGATB
----TTATGTAACAT-
 G C T A A G C T A C T G A C G T A T C G A C G T T C G A G A T C A T G C A C G T C G T A C G T A A C T G G T C A A C G T A G T C
A C G T A C G T A C G T A C G T C G A T A C G T C G T A A G C T C T A G A C G T C G T A C T G A A G T C T C A G G A C T A C G T

PB0160.1_Rfxdc2_2/Jaspar

Match Rank:6
Score:0.49
Offset:-1
Orientation:reverse strand
Alignment:-ATGTGTVHCTAAGATB
NTNNCGTATCCAAGTNN
 A C G T G C T A A G C T A C T G A C G T A T C G A C G T T C G A G A T C A T G C A C G T C G T A C G T A A C T G G T C A A C G T A G T C
C G T A C G A T G C A T A T G C A T G C C T A G G A C T G T C A C G A T A G T C A G T C C T G A G T C A T A C G A G C T T G C A T A C G

Rfx5(HTH)/GM12878-Rfx5-ChIP-Seq(GSE31477)/Homer

Match Rank:7
Score:0.48
Offset:2
Orientation:reverse strand
Alignment:ATGTGTVHCTAAGATB
--CTGTTGCTAGGS--
 G C T A A G C T A C T G A C G T A T C G A C G T T C G A G A T C A T G C A C G T C G T A C G T A A C T G G T C A A C G T A G T C
A C G T A C G T A G T C C G A T A C T G A C G T G A C T C T A G A G T C A G C T C T G A C A T G C T A G T A C G A C G T A C G T

PB0181.1_Spdef_2/Jaspar

Match Rank:8
Score:0.48
Offset:5
Orientation:reverse strand
Alignment:ATGTGTVHCTAAGATB-----
-----CTACTAGGATGTNNTN
 G C T A A G C T A C T G A C G T A T C G A C G T T C G A G A T C A T G C A C G T C G T A C G T A A C T G G T C A A C G T A G T C A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A G T C G C A T C G T A T G A C C G A T T C G A T A C G C A T G C G T A G A C T C T A G G A C T C G A T T C G A G C A T G A T C

PB0197.1_Zfp105_2/Jaspar

Match Rank:9
Score:0.47
Offset:0
Orientation:forward strand
Alignment:ATGTGTVHCTAAGATB-
ATGGTTCAATAATTTTG
 G C T A A G C T A C T G A C G T A T C G A C G T T C G A G A T C A T G C A C G T C G T A C G T A A C T G G T C A A C G T A G T C A C G T
C T A G A G C T C A T G T A C G A C G T A G C T T G A C T G C A T G C A A G C T T C G A C G T A A G C T C A G T A G C T A C G T C T A G

HMBOX1/MA0895.1/Jaspar

Match Rank:10
Score:0.47
Offset:3
Orientation:reverse strand
Alignment:ATGTGTVHCTAAGATB
---GTTAACTAGN---
 G C T A A G C T A C T G A C G T A T C G A C G T T C G A G A T C A T G C A C G T C G T A C G T A A C T G G T C A A C G T A G T C
A C G T A C G T A C G T A T C G C A G T G C A T C G T A G C T A T A G C G A C T G C T A T C A G A C G T A C G T A C G T A C G T