p-value: | 1e-11 |
log p-value: | -2.662e+01 |
Information Content per bp: | 1.641 |
Number of Target Sequences with motif | 75.0 |
Percentage of Target Sequences with motif | 9.73% |
Number of Background Sequences with motif | 1837.1 |
Percentage of Background Sequences with motif | 3.98% |
Average Position of motif in Targets | 49.8 +/- 27.6bp |
Average Position of motif in Background | 50.2 +/- 31.9bp |
Strand Bias (log2 ratio + to - strand density) | 0.1 |
Multiplicity (# of sites on avg that occur together) | 1.11 |
Motif File: | file (matrix) reverse opposite |
SVG Files for Logos: | forward logo reverse opposite |
NF1-halfsite(CTF)/LNCaP-NF1-ChIP-Seq(Unpublished)/Homer
Match Rank: | 1 |
Score: | 0.80 |
Offset: | 1 |
Orientation: | reverse strand |
Alignment: | AGCTGGCAGG -CTTGGCAA- |
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Tgif2(Homeobox)/mES-Tgif2-ChIP-Seq(GSE55404)/Homer
Match Rank: | 2 |
Score: | 0.77 |
Offset: | 0 |
Orientation: | reverse strand |
Alignment: | AGCTGGCAGG ARNTGACA-- |
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NFIC/MA0161.1/Jaspar
Match Rank: | 3 |
Score: | 0.76 |
Offset: | 2 |
Orientation: | forward strand |
Alignment: | AGCTGGCAGG --TTGGCA-- |
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NFIX/MA0671.1/Jaspar
Match Rank: | 4 |
Score: | 0.76 |
Offset: | 1 |
Orientation: | reverse strand |
Alignment: | AGCTGGCAGG -NTTGGCANN |
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Hic1/MA0739.1/Jaspar
Match Rank: | 5 |
Score: | 0.75 |
Offset: | 0 |
Orientation: | reverse strand |
Alignment: | AGCTGGCAGG GGTTGGCAT- |
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Meis1(Homeobox)/MastCells-Meis1-ChIP-Seq(GSE48085)/Homer
Match Rank: | 6 |
Score: | 0.74 |
Offset: | 1 |
Orientation: | reverse strand |
Alignment: | AGCTGGCAGG- -VBTGWCAGCB |
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Tgif1(Homeobox)/mES-Tgif1-ChIP-Seq(GSE55404)/Homer
Match Rank: | 7 |
Score: | 0.73 |
Offset: | 1 |
Orientation: | reverse strand |
Alignment: | AGCTGGCAGG -RHTGWCAR- |
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MEIS2/MA0774.1/Jaspar
Match Rank: | 8 |
Score: | 0.73 |
Offset: | 2 |
Orientation: | forward strand |
Alignment: | AGCTGGCAGG --TTGACAGC |
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NFIA/MA0670.1/Jaspar
Match Rank: | 9 |
Score: | 0.73 |
Offset: | 0 |
Orientation: | reverse strand |
Alignment: | AGCTGGCAGG NNTTGGCANN |
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Tbx20(T-box)/Heart-Tbx20-ChIP-Seq(GSE29636)/Homer
Match Rank: | 10 |
Score: | 0.71 |
Offset: | -2 |
Orientation: | forward strand |
Alignment: | --AGCTGGCAGG GGTGYTGACAGS |
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