Information for 13-CAAGTCCAGG (Motif 22)

A G T C G T C A C G T A A C T G C G A T A G T C A G T C C G T A A C T G A C T G
Reverse Opposite:
A G T C A G T C A C G T A C T G A C T G C G T A G T A C A C G T A C G T A C T G
p-value:1e-7
log p-value:-1.627e+01
Information Content per bp:1.936
Number of Target Sequences with motif9.0
Percentage of Target Sequences with motif1.17%
Number of Background Sequences with motif44.8
Percentage of Background Sequences with motif0.10%
Average Position of motif in Targets37.7 +/- 15.4bp
Average Position of motif in Background47.9 +/- 25.5bp
Strand Bias (log2 ratio + to - strand density)-0.3
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

SF1(NR)/H295R-Nr5a1-ChIP-Seq(GSE44220)/Homer

Match Rank:1
Score:0.66
Offset:0
Orientation:forward strand
Alignment:CAAGTCCAGG
CAAGGHCANV
 A G T C G T C A C G T A A C T G C G A T A G T C A G T C C G T A A C T G A C T G
T G A C C G T A C T G A A C T G A C T G G A C T G A T C T G C A G T A C T A C G

PB0134.1_Hnf4a_2/Jaspar

Match Rank:2
Score:0.64
Offset:-4
Orientation:forward strand
Alignment:----CAAGTCCAGG--
GGCAAAAGTCCAATAA
 A C G T A C G T A C G T A C G T A G T C G T C A C G T A A C T G C G A T A G T C A G T C C G T A A C T G A C T G A C G T A C G T
A C G T A C G T G A T C G T A C C G T A C T G A C T G A A C T G A C G T G T A C A G T C C T G A G T C A C G A T G T C A G C A T

Nr5a2/MA0505.1/Jaspar

Match Rank:3
Score:0.64
Offset:-5
Orientation:forward strand
Alignment:-----CAAGTCCAGG
AAGTTCAAGGTCAGC
 A C G T A C G T A C G T A C G T A C G T A G T C G T C A C G T A A C T G C G A T A G T C A G T C C G T A A C T G A C T G
T C G A C T G A C T A G A G C T G A C T T A G C G T C A C T G A C T A G A C T G G A C T A G T C C G T A A C T G A T G C

Nr5a2(NR)/mES-Nr5a2-ChIP-Seq(GSE19019)/Homer

Match Rank:4
Score:0.63
Offset:-2
Orientation:forward strand
Alignment:--CAAGTCCAGG
NTCAAGGTCA--
 A C G T A C G T A G T C G T C A C G T A A C T G C G A T A G T C A G T C C G T A A C T G A C T G
A C G T G A C T A T G C G C T A C T G A C T A G A C T G G A C T A G T C C G T A A C G T A C G T

Nr5a2(NR)/Pancreas-LRH1-ChIP-Seq(GSE34295)/Homer

Match Rank:5
Score:0.62
Offset:-2
Orientation:forward strand
Alignment:--CAAGTCCAGG
BTCAAGGTCA--
 A C G T A C G T A G T C G T C A C G T A A C T G C G A T A G T C A G T C C G T A A C T G A C T G
A C G T G A C T T A G C C G T A C T G A C A T G C T A G G A C T G A T C C G T A A C G T A C G T

p53(p53)/mES-cMyc-ChIP-Seq(GSE11431)/Homer

Match Rank:6
Score:0.62
Offset:-1
Orientation:forward strand
Alignment:-CAAGTCCAGG---
ACATGCCCGGGCAT
 A C G T A G T C G T C A C G T A A C T G C G A T A G T C A G T C C G T A A C T G A C T G A C G T A C G T A C G T
C T G A T A G C G C T A C G A T A T C G A G T C G A T C G A T C C T A G T C A G T C A G G T A C G C T A C A G T

TEAD(TEA)/Fibroblast-PU.1-ChIP-Seq(Unpublished)/Homer

Match Rank:7
Score:0.59
Offset:0
Orientation:reverse strand
Alignment:CAAGTCCAGG
GCATTCCAGN
 A G T C G T C A C G T A A C T G C G A T A G T C A G T C C G T A A C T G A C T G
C T A G T G A C C G T A A C G T A C G T A G T C A G T C C G T A C A T G C T A G

TEAD2(TEA)/Py2T-Tead2-ChIP-Seq(GSE55709)/Homer

Match Rank:8
Score:0.59
Offset:0
Orientation:reverse strand
Alignment:CAAGTCCAGG
RCATTCCWGG
 A G T C G T C A C G T A A C T G C G A T A G T C A G T C C G T A A C T G A C T G
C T G A T G A C C T G A A C G T C G A T A G T C A G T C G C T A C T A G T A C G

Erra(NR)/HepG2-Erra-ChIP-Seq(GSE31477)/Homer

Match Rank:9
Score:0.58
Offset:-1
Orientation:forward strand
Alignment:-CAAGTCCAGG
CAAAGGTCAG-
 A C G T A G T C G T C A C G T A A C T G C G A T A G T C A G T C C G T A A C T G A C T G
A G T C T G C A T C G A C T G A A C T G C A T G A C G T A T G C G T C A T A C G A C G T

ZEB1(Zf)/PDAC-ZEB1-ChIP-Seq(GSE64557)/Homer

Match Rank:10
Score:0.58
Offset:5
Orientation:forward strand
Alignment:CAAGTCCAGG-----
-----VCAGGTRDRY
 A G T C G T C A C G T A A C T G C G A T A G T C A G T C C G T A A C T G A C T G A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T T G C A G T A C C G T A A T C G A C T G A C G T C T A G C G A T T C G A A G T C