Information for 5-TCAAAGGCTMTTTACW (Motif 12)

A C G T G T A C C T G A C T G A C G T A A C T G T C A G A G T C G A C T T G C A A C G T C G A T A C G T G T C A T A G C G C T A
Reverse Opposite:
C G A T A T C G A C G T T G C A G C T A C G T A A C G T C T G A C T A G A G T C A G T C A C G T G A C T G A C T C A T G T G C A
p-value:1e-10
log p-value:-2.460e+01
Information Content per bp:1.667
Number of Target Sequences with motif6.0
Percentage of Target Sequences with motif0.78%
Number of Background Sequences with motif3.6
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets38.3 +/- 27.0bp
Average Position of motif in Background56.3 +/- 11.9bp
Strand Bias (log2 ratio + to - strand density)1.3
Multiplicity (# of sites on avg that occur together)1.17
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

SD0003.1_at_AC_acceptor/Jaspar

Match Rank:1
Score:0.60
Offset:3
Orientation:reverse strand
Alignment:TCAAAGGCTMTTTACW
---AAGGATATNTN--
 A C G T G T A C C T G A C T G A C G T A A C T G T C A G A G T C G A C T T G C A A C G T C G A T A C G T G T C A T A G C G C T A
A C G T A C G T A C G T T C G A C G T A C T A G T A C G C G T A A G C T C G T A A C G T A G T C C G A T C G A T A C G T A C G T

Nr5a2(NR)/mES-Nr5a2-ChIP-Seq(GSE19019)/Homer

Match Rank:2
Score:0.56
Offset:0
Orientation:forward strand
Alignment:TCAAAGGCTMTTTACW
NTCAAGGTCA------
 A C G T G T A C C T G A C T G A C G T A A C T G T C A G A G T C G A C T T G C A A C G T C G A T A C G T G T C A T A G C G C T A
A C G T G A C T A T G C G C T A C T G A C T A G A C T G G A C T A G T C C G T A A C G T A C G T A C G T A C G T A C G T A C G T

Nr5a2(NR)/Pancreas-LRH1-ChIP-Seq(GSE34295)/Homer

Match Rank:3
Score:0.55
Offset:0
Orientation:forward strand
Alignment:TCAAAGGCTMTTTACW
BTCAAGGTCA------
 A C G T G T A C C T G A C T G A C G T A A C T G T C A G A G T C G A C T T G C A A C G T C G A T A C G T G T C A T A G C G C T A
A C G T G A C T T A G C C G T A C T G A C A T G C T A G G A C T G A T C C G T A A C G T A C G T A C G T A C G T A C G T A C G T

Esrra/MA0592.2/Jaspar

Match Rank:4
Score:0.55
Offset:0
Orientation:forward strand
Alignment:TCAAAGGCTMTTTACW
TTCAAGGTCAT-----
 A C G T G T A C C T G A C T G A C G T A A C T G T C A G A G T C G A C T T G C A A C G T C G A T A C G T G T C A T A G C G C T A
A C G T G A C T T A G C C T G A C T G A A C T G A C T G A C G T A T G C T C G A G C A T A C G T A C G T A C G T A C G T A C G T

SF1(NR)/H295R-Nr5a1-ChIP-Seq(GSE44220)/Homer

Match Rank:5
Score:0.55
Offset:2
Orientation:forward strand
Alignment:TCAAAGGCTMTTTACW
--CAAGGHCANV----
 A C G T G T A C C T G A C T G A C G T A A C T G T C A G A G T C G A C T T G C A A C G T C G A T A C G T G T C A T A G C G C T A
A C G T A C G T T G A C C G T A C T G A A C T G A C T G G A C T G A T C T G C A G T A C T A C G A C G T A C G T A C G T A C G T

Esrrg/MA0643.1/Jaspar

Match Rank:6
Score:0.54
Offset:1
Orientation:forward strand
Alignment:TCAAAGGCTMTTTACW
-TCAAGGTCAT-----
 A C G T G T A C C T G A C T G A C G T A A C T G T C A G A G T C G A C T T G C A A C G T C G A T A C G T G T C A T A G C G C T A
A C G T G A C T T A G C C T G A T C G A C A T G A T C G C A G T A G T C C T G A G C A T A C G T A C G T A C G T A C G T A C G T

TCFL2(HMG)/K562-TCF7L2-ChIP-Seq(GSE29196)/Homer

Match Rank:7
Score:0.53
Offset:-3
Orientation:forward strand
Alignment:---TCAAAGGCTMTTTACW
ACWTCAAAGG---------
 A C G T A C G T A C G T A C G T G T A C C T G A C T G A C G T A A C T G T C A G A G T C G A C T T G C A A C G T C G A T A C G T G T C A T A G C G C T A
C G T A A T G C C G A T A C G T A G T C C G T A C G T A C G T A C T A G A T C G A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

PB0014.1_Esrra_1/Jaspar

Match Rank:8
Score:0.53
Offset:-2
Orientation:forward strand
Alignment:--TCAAAGGCTMTTTACW
TATTCAAGGTCATGCGA-
 A C G T A C G T A C G T G T A C C T G A C T G A C G T A A C T G T C A G A G T C G A C T T G C A A C G T C G A T A C G T G T C A T A G C G C T A
C A G T G T C A A C G T A G C T T A G C C T G A C T G A C A T G C A T G C A G T A G T C C T G A G C A T T C A G A G T C A C T G G T C A A C G T

Foxa2(Forkhead)/Liver-Foxa2-ChIP-Seq(GSE25694)/Homer

Match Rank:9
Score:0.52
Offset:6
Orientation:forward strand
Alignment:TCAAAGGCTMTTTACW--
------CNTGTTTACATA
 A C G T G T A C C T G A C T G A C G T A A C T G T C A G A G T C G A C T T G C A A C G T C G A T A C G T G T C A T A G C G C T A A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A T G C G A C T A C G T C T A G A C G T A C G T A C G T C T G A G A T C G C T A A G C T C G T A

Erra(NR)/HepG2-Erra-ChIP-Seq(GSE31477)/Homer

Match Rank:10
Score:0.52
Offset:1
Orientation:forward strand
Alignment:TCAAAGGCTMTTTACW
-CAAAGGTCAG-----
 A C G T G T A C C T G A C T G A C G T A A C T G T C A G A G T C G A C T T G C A A C G T C G A T A C G T G T C A T A G C G C T A
A C G T A G T C T G C A T C G A C T G A A C T G C A T G A C G T A T G C G T C A T A C G A C G T A C G T A C G T A C G T A C G T