Information for 4-YTGGGCAGGCTGCCCA (Motif 7)

G A C T C G A T A C T G C T A G C A T G G T A C C G T A A C T G A C T G G T A C G C A T C A T G G T A C G T A C G T A C G T C A
Reverse Opposite:
C A G T C A T G A C T G A C T G G T A C C G T A A C T G A G T C T A G C A C G T A C T G G T A C G A T C T A G C G C T A C T G A
p-value:1e-12
log p-value:-2.898e+01
Information Content per bp:1.701
Number of Target Sequences with motif10.0
Percentage of Target Sequences with motif1.31%
Number of Background Sequences with motif16.8
Percentage of Background Sequences with motif0.04%
Average Position of motif in Targets64.2 +/- 21.6bp
Average Position of motif in Background49.9 +/- 20.0bp
Strand Bias (log2 ratio + to - strand density)0.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Tlx?(NR)/NPC-H3K4me1-ChIP-Seq(GSE16256)/Homer

Match Rank:1
Score:0.61
Offset:1
Orientation:forward strand
Alignment:YTGGGCAGGCTGCCCA
-CTGGCAGNCTGCCA-
 G A C T C G A T A C T G C T A G C A T G G T A C C G T A A C T G A C T G G T A C G C A T C A T G G T A C G T A C G T A C G T C A
A C G T A G T C C G A T A C T G A T C G T G A C G C T A C A T G A T C G T G A C C G A T A C T G T A G C G T A C G T C A A C G T

NFIC::TLX1/MA0119.1/Jaspar

Match Rank:2
Score:0.60
Offset:1
Orientation:reverse strand
Alignment:YTGGGCAGGCTGCCCA
-TTGGCATGGTGCCA-
 G A C T C G A T A C T G C T A G C A T G G T A C C G T A A C T G A C T G G T A C G C A T C A T G G T A C G T A C G T A C G T C A
A C G T G A C T A C G T A C T G A C T G A G T C C G T A G A C T A T C G A T C G C A G T A C T G A G T C A G T C C G T A A C G T

ERE(NR),IR3/MCF7-ERa-ChIP-Seq(Unpublished)/Homer

Match Rank:3
Score:0.59
Offset:2
Orientation:reverse strand
Alignment:YTGGGCAGGCTGCCCA-
--GGTCANNGTGACCTN
 G A C T C G A T A C T G C T A G C A T G G T A C C G T A A C T G A C T G G T A C G C A T C A T G G T A C G T A C G T A C G T C A A C G T
A C G T A C G T C A T G C T A G C A G T A G T C C G T A A T G C T A C G T A C G G C A T T C A G G T C A G A T C G T A C G A C T A C G T

POL010.1_DCE_S_III/Jaspar

Match Rank:4
Score:0.58
Offset:7
Orientation:reverse strand
Alignment:YTGGGCAGGCTGCCCA
-------NGCTN----
 G A C T C G A T A C T G C T A G C A T G G T A C C G T A A C T G A C T G G T A C G C A T C A T G G T A C G T A C G T A C G T C A
A C G T A C G T A C G T A C G T A C G T A C G T A C G T T A C G A C T G A G T C A C G T A T C G A C G T A C G T A C G T A C G T

NF1(CTF)/LNCAP-NF1-ChIP-Seq(Unpublished)/Homer

Match Rank:5
Score:0.57
Offset:0
Orientation:forward strand
Alignment:YTGGGCAGGCTGCCCA
CTTGGCANNNTGCCAA
 G A C T C G A T A C T G C T A G C A T G G T A C C G T A A C T G A C T G G T A C G C A T C A T G G T A C G T A C G T A C G T C A
A G T C G A C T C A G T A C T G C T A G T G A C G C T A A T G C G C A T A T C G C G A T A C T G G A T C G T A C G T C A C T G A

ESR2/MA0258.2/Jaspar

Match Rank:6
Score:0.56
Offset:1
Orientation:reverse strand
Alignment:YTGGGCAGGCTGCCCA
-AGGNCANNGTGACCT
 G A C T C G A T A C T G C T A G C A T G G T A C C G T A A C T G A C T G G T A C G C A T C A T G G T A C G T A C G T A C G T C A
A C G T C T G A C T A G C T A G C A G T A G T C C G T A A T C G A C T G T A C G G C A T T A C G T G C A G A T C G T A C G A C T

PB0154.1_Osr1_2/Jaspar

Match Rank:7
Score:0.55
Offset:4
Orientation:forward strand
Alignment:YTGGGCAGGCTGCCCA----
----ACATGCTACCTAATAC
 G A C T C G A T A C T G C T A G C A T G G T A C C G T A A C T G A C T G G T A C G C A T C A T G G T A C G T A C G T A C G T C A A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T C T G A G A T C G C T A G A C T T C A G G A T C A G C T C G T A G T A C G A T C G C A T T C G A G T C A C G A T G T C A T G A C

POL008.1_DCE_S_I/Jaspar

Match Rank:8
Score:0.53
Offset:8
Orientation:forward strand
Alignment:YTGGGCAGGCTGCCCA
--------GCTTCC--
 G A C T C G A T A C T G C T A G C A T G G T A C C G T A A C T G A C T G G T A C G C A T C A T G G T A C G T A C G T A C G T C A
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C T G A T G C A G C T A C G T A T G C A T G C A C G T A C G T

THAP1/MA0597.1/Jaspar

Match Rank:9
Score:0.53
Offset:9
Orientation:forward strand
Alignment:YTGGGCAGGCTGCCCA--
---------CTGCCCGCA
 G A C T C G A T A C T G C T A G C A T G G T A C C G T A A C T G A C T G G T A C G C A T C A T G G T A C G T A C G T A C G T C A A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A G T C G A C T C A T G G A T C G T A C G T A C C A T G A G T C G T C A

ZNF416(Zf)/HEK293-ZNF416.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:10
Score:0.51
Offset:-3
Orientation:forward strand
Alignment:---YTGGGCAGGCTGCCCA
WDNCTGGGCA---------
 A C G T A C G T A C G T G A C T C G A T A C T G C T A G C A T G G T A C C G T A A C T G A C T G G T A C G C A T C A T G G T A C G T A C G T A C G T C A
G C A T C T A G G T A C A G T C C G A T A C T G C T A G C T A G G T A C G C T A A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T