Information for 6-TGTTCCCAAG (Motif 6)

A C G T T C A G G A C T A C G T A G T C G T A C G T A C C T G A C G T A C A T G
Reverse Opposite:
G T A C G C A T G A C T C A T G C A T G T C A G T G C A C T G A A G T C T G C A
p-value:1e-14
log p-value:-3.371e+01
Information Content per bp:1.650
Number of Target Sequences with motif97.0
Percentage of Target Sequences with motif12.75%
Number of Background Sequences with motif2497.5
Percentage of Background Sequences with motif5.27%
Average Position of motif in Targets49.3 +/- 27.9bp
Average Position of motif in Background50.3 +/- 30.4bp
Strand Bias (log2 ratio + to - strand density)0.1
Multiplicity (# of sites on avg that occur together)1.02
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Rbpj1(?)/Panc1-Rbpj1-ChIP-Seq(GSE47459)/Homer

Match Rank:1
Score:0.77
Offset:0
Orientation:forward strand
Alignment:TGTTCCCAAG
HTTTCCCASG
 A C G T T C A G G A C T A C G T A G T C G T A C G T A C C T G A C G T A C A T G
G A C T C A G T A G C T C G A T A G T C G A T C A G T C C G T A A T G C T C A G

Rfx5(HTH)/GM12878-Rfx5-ChIP-Seq(GSE31477)/Homer

Match Rank:2
Score:0.71
Offset:-1
Orientation:reverse strand
Alignment:-TGTTCCCAAG-
CTGTTGCTAGGS
 A C G T A C G T T C A G G A C T A C G T A G T C G T A C G T A C C T G A C G T A C A T G A C G T
A G T C C G A T A C T G A C G T G A C T C T A G A G T C A G C T C T G A C A T G C T A G T A C G

PB0133.1_Hic1_2/Jaspar

Match Rank:3
Score:0.71
Offset:-3
Orientation:forward strand
Alignment:---TGTTCCCAAG---
GGGTGTGCCCAAAAGG
 A C G T A C G T A C G T A C G T T C A G G A C T A C G T A G T C G T A C G T A C C T G A C G T A C A T G A C G T A C G T A C G T
C A T G A T C G C A T G C A G T C T A G A C G T C T A G A G T C A G T C G T A C G T C A C G T A C G T A G T C A C T A G T A C G

Rfx1/MA0509.1/Jaspar

Match Rank:4
Score:0.66
Offset:1
Orientation:reverse strand
Alignment:TGTTCCCAAG-----
-GTTGCCATGGNAAC
 A C G T T C A G G A C T A C G T A G T C G T A C G T A C C T G A C G T A C A T G A C G T A C G T A C G T A C G T A C G T
A C G T A C T G A G C T G A C T C A T G A G T C A G T C C G T A C G A T C T A G T C A G T G A C C T G A T G C A G A T C

ZNF189(Zf)/HEK293-ZNF189.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:5
Score:0.65
Offset:-3
Orientation:reverse strand
Alignment:---TGTTCCCAAG
TKCTGTTCCA---
 A C G T A C G T A C G T A C G T T C A G G A C T A C G T A G T C G T A C G T A C C T G A C G T A C A T G
A C G T C A G T T A G C A G C T T A C G C G A T A C G T A G T C G T A C G T C A A C G T A C G T A C G T

PB0158.1_Rfx3_2/Jaspar

Match Rank:6
Score:0.64
Offset:-6
Orientation:reverse strand
Alignment:------TGTTCCCAAG-------
NNTNGNNGTAACCAAGNNNNAGN
 A C G T A C G T A C G T A C G T A C G T A C G T A C G T T C A G G A C T A C G T A G T C G T A C G T A C C T G A C G T A C A T G A C G T A C G T A C G T A C G T A C G T A C G T A C G T
T A G C G C A T A G C T A G C T A C T G A G C T A C T G C A T G G A C T G T C A G C T A T A G C A G T C C G T A C G T A T A C G A T C G T A C G C G A T T A G C T G C A C T A G A C G T

Rfx1(HTH)/NPC-H3K4me1-ChIP-Seq(GSE16256)/Homer

Match Rank:7
Score:0.63
Offset:0
Orientation:forward strand
Alignment:TGTTCCCAAG----
NGTTGCCATGGCAA
 A C G T T C A G G A C T A C G T A G T C G T A C G T A C C T G A C G T A C A T G A C G T A C G T A C G T A C G T
A C T G T C A G A G C T G A C T C A T G A G T C A G T C G C T A C G A T C T A G T C A G G T A C C T G A T C G A

NFIA/MA0670.1/Jaspar

Match Rank:8
Score:0.63
Offset:1
Orientation:forward strand
Alignment:TGTTCCCAAG-
-GGTGCCAAGT
 A C G T T C A G G A C T A C G T A G T C G T A C G T A C C T G A C G T A C A T G A C G T
A C G T T C A G C A T G A C G T A C T G A G T C A G T C C G T A C G T A T C A G C G A T

X-box(HTH)/NPC-H3K4me1-ChIP-Seq(GSE16256)/Homer

Match Rank:9
Score:0.63
Offset:0
Orientation:forward strand
Alignment:TGTTCCCAAG----
GGTTGCCATGGCAA
 A C G T T C A G G A C T A C G T A G T C G T A C G T A C C T G A C G T A C A T G A C G T A C G T A C G T A C G T
C A T G C T A G A G C T G A C T C A T G A G T C G A T C G C T A C G A T C T A G T C A G G T A C C T G A T C G A

AR-halfsite(NR)/LNCaP-AR-ChIP-Seq(GSE27824)/Homer

Match Rank:10
Score:0.62
Offset:-1
Orientation:reverse strand
Alignment:-TGTTCCCAAG
CTGTTCCTGG-
 A C G T A C G T T C A G G A C T A C G T A G T C G T A C G T A C C T G A C G T A C A T G
T A G C C G A T A T C G A C G T A C G T A G T C A G T C G C A T C A T G A T C G A C G T