Information for 25-TGTGCAGMGAAGA (Motif 45)

A C G T A C T G C G A T A C T G T A G C C G T A C T A G G T A C C T A G G T C A C G T A A C T G G T C A
Reverse Opposite:
A C G T A G T C A C G T A C G T A G T C C A T G A G T C A C G T A T C G A G T C C G T A A G T C G T C A
p-value:1e-5
log p-value:-1.330e+01
Information Content per bp:1.787
Number of Target Sequences with motif10.0
Percentage of Target Sequences with motif1.34%
Number of Background Sequences with motif88.1
Percentage of Background Sequences with motif0.18%
Average Position of motif in Targets59.7 +/- 19.6bp
Average Position of motif in Background49.2 +/- 28.1bp
Strand Bias (log2 ratio + to - strand density)-1.2
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

POL008.1_DCE_S_I/Jaspar

Match Rank:1
Score:0.61
Offset:7
Orientation:reverse strand
Alignment:TGTGCAGMGAAGA
-------NGAAGC
 A C G T A C T G C G A T A C T G T A G C C G T A C T A G G T A C C T A G G T C A C G T A A C T G G T C A
A C G T A C G T A C G T A C G T A C G T A C G T A C G T T A C G T A C G T G C A T C G A T A C G T G A C

PB0044.1_Mtf1_1/Jaspar

Match Rank:2
Score:0.58
Offset:-6
Orientation:forward strand
Alignment:------TGTGCAGMGAAGA
GGGCCGTGTGCAAAAA---
 A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C T G C G A T A C T G T A G C C G T A C T A G G T A C C T A G G T C A C G T A A C T G G T C A
C A T G A C T G C T A G G A T C G T A C C A T G C A G T A C T G G A C T C A T G G T A C C G T A T G C A G T C A C T G A G C A T A C G T A C G T A C G T

PB0104.1_Zscan4_1/Jaspar

Match Rank:3
Score:0.56
Offset:-4
Orientation:forward strand
Alignment:----TGTGCAGMGAAGA
TACATGTGCACATAAAA
 A C G T A C G T A C G T A C G T A C G T A C T G C G A T A C T G T A G C C G T A C T A G G T A C C T A G G T C A C G T A A C T G G T C A
C A G T G T C A T G A C C T G A C G A T T C A G A G C T C T A G A G T C C T G A A G T C G C T A A G C T G C T A G C T A C G T A G T C A

PB0026.1_Gm397_1/Jaspar

Match Rank:4
Score:0.56
Offset:-4
Orientation:forward strand
Alignment:----TGTGCAGMGAAGA
CAGATGTGCACATACGT
 A C G T A C G T A C G T A C G T A C G T A C T G C G A T A C T G T A G C C G T A C T A G G T A C C T A G G T C A C G T A A C T G G T C A
G T A C G C T A C A T G C G T A C G A T T A C G A G C T C T A G A G T C C T G A A T G C G C T A A G C T G T C A G T A C C A T G G A C T

PAX5/MA0014.2/Jaspar

Match Rank:5
Score:0.56
Offset:-1
Orientation:forward strand
Alignment:-TGTGCAGMGAAGA-----
GAGGGCAGCCAAGCGTGAC
 A C G T A C G T A C T G C G A T A C T G T A G C C G T A C T A G G T A C C T A G G T C A C G T A A C T G G T C A A C G T A C G T A C G T A C G T A C G T
T C A G C G T A T C A G C T A G A C T G G A T C C T G A T A C G A G T C T A G C T C G A C T G A A T C G A G T C C T A G C A G T C T A G C T G A G T A C

Gata4/MA0482.1/Jaspar

Match Rank:6
Score:0.53
Offset:2
Orientation:reverse strand
Alignment:TGTGCAGMGAAGA
--NNGAGATAAGA
 A C G T A C T G C G A T A C T G T A G C C G T A C T A G G T A C C T A G G T C A C G T A A C T G G T C A
A C G T A C G T T C A G C T A G T A C G C G T A A C T G C G T A A C G T C G T A C T G A T A C G T C G A

Gata1/MA0035.3/Jaspar

Match Rank:7
Score:0.53
Offset:3
Orientation:reverse strand
Alignment:TGTGCAGMGAAGA-
---ANAGATAAGAA
 A C G T A C T G C G A T A C T G T A G C C G T A C T A G G T A C C T A G G T C A C G T A A C T G G T C A A C G T
A C G T A C G T A C G T C T G A T A G C C G T A A C T G C G T A A C G T C G T A C T G A T C A G T C G A T C G A

GATA3/MA0037.2/Jaspar

Match Rank:8
Score:0.53
Offset:5
Orientation:forward strand
Alignment:TGTGCAGMGAAGA
-----AGATAAGA
 A C G T A C T G C G A T A C T G T A G C C G T A C T A G G T A C C T A G G T C A C G T A A C T G G T C A
A C G T A C G T A C G T A C G T A C G T C G T A A C T G C G T A A C G T C G T A C G T A C T A G T C G A

PAX6(Paired,Homeobox)/Forebrain-Pax6-ChIP-Seq(GSE66961)/Homer

Match Rank:9
Score:0.52
Offset:-2
Orientation:forward strand
Alignment:--TGTGCAGMGAAGA-----
NGTGTTCAVTSAAGCGKAAA
 A C G T A C G T A C G T A C T G C G A T A C T G T A G C C G T A C T A G G T A C C T A G G T C A C G T A A C T G G T C A A C G T A C G T A C G T A C G T A C G T
A G C T T A C G C G A T T C A G A G C T A C G T G A T C C T G A T A G C A G C T A T G C C T G A C G T A A T C G A G T C C T A G A C T G C T G A G T C A T C G A

PB0021.1_Gata3_1/Jaspar

Match Rank:10
Score:0.52
Offset:-2
Orientation:forward strand
Alignment:--TGTGCAGMGAAGA-------
TTTTTAGAGATAAGAAATAAAG
 A C G T A C G T A C G T A C T G C G A T A C T G T A G C C G T A C T A G G T A C C T A G G T C A C G T A A C T G G T C A A C G T A C G T A C G T A C G T A C G T A C G T A C G T
A C G T C A G T G C A T C A G T C G A T C T G A C A T G G C T A A C T G C G T A C G A T G C T A C G T A T A C G T G C A C T G A G C T A A C G T C G T A G T C A T C G A C A T G