Information for 21-GTTATTCCTTCMAYAT (Motif 39)

A C T G A C G T C G A T C G T A A C G T A C G T G T A C G A T C A C G T A C G T A G T C G T A C C G T A A G T C C G T A A C G T
Reverse Opposite:
C G T A C G A T T C A G C G A T A C T G A C T G C G T A T C G A C T A G C A T G C G T A G T C A C G A T C G T A C G T A G T A C
p-value:1e-8
log p-value:-1.988e+01
Information Content per bp:1.761
Number of Target Sequences with motif4.0
Percentage of Target Sequences with motif0.53%
Number of Background Sequences with motif1.7
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets47.0 +/- 22.6bp
Average Position of motif in Background25.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)0.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0028.1_Hbp1_1/Jaspar

Match Rank:1
Score:0.54
Offset:0
Orientation:reverse strand
Alignment:GTTATTCCTTCMAYAT
NNCATTCATTCATNNN
 A C T G A C G T C G A T C G T A A C G T A C G T G T A C G A T C A C G T A C G T A G T C G T A C C G T A A G T C C G T A A C G T
T C G A G A C T G T A C C G T A A G C T G A C T T G A C C G T A C G A T G C A T A T G C C G T A C G A T G C T A A C T G C G A T

PB0119.1_Foxa2_2/Jaspar

Match Rank:2
Score:0.54
Offset:-6
Orientation:reverse strand
Alignment:------GTTATTCCTTCMAYAT
NCNTTTGTTATTTNN-------
 A C G T A C G T A C G T A C G T A C G T A C G T A C T G A C G T C G A T C G T A A C G T A C G T G T A C G A T C A C G T A C G T A G T C G T A C C G T A A G T C C G T A A C G T
A T G C A T G C A T C G A G C T C A G T C A G T C T A G G C A T G A C T T C G A C A G T G A C T G C A T A G C T A G C T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

PH0020.1_Dlx1/Jaspar

Match Rank:3
Score:0.54
Offset:-1
Orientation:reverse strand
Alignment:-GTTATTCCTTCMAYAT
ATTAATTANCTCAN---
 A C G T A C T G A C G T C G A T C G T A A C G T A C G T G T A C G A T C A C G T A C G T A G T C G T A C C G T A A G T C C G T A A C G T
T C G A G A C T G A C T T C G A C G T A C G A T A C G T C T G A G A T C G A T C A C G T A G T C C T G A T A C G A C G T A C G T A C G T

Hoxd3/MA0912.1/Jaspar

Match Rank:4
Score:0.54
Offset:-3
Orientation:reverse strand
Alignment:---GTTATTCCTTCMAYAT
ANGNTAATTANCNCAN---
 A C G T A C G T A C G T A C T G A C G T C G A T C G T A A C G T A C G T G T A C G A T C A C G T A C G T A G T C G T A C C G T A A G T C C G T A A C G T
T C G A T A C G C A T G A C G T G A C T G T C A G C T A C A G T A C G T C T G A T G C A G A T C G A C T G T A C C G T A C T G A A C G T A C G T A C G T

PH0079.1_Hoxd3/Jaspar

Match Rank:5
Score:0.54
Offset:-3
Orientation:reverse strand
Alignment:---GTTATTCCTTCMAYAT
ANGNTAATTANCNCAN---
 A C G T A C G T A C G T A C T G A C G T C G A T C G T A A C G T A C G T G T A C G A T C A C G T A C G T A G T C G T A C C G T A A G T C C G T A A C G T
T C G A T A C G C A T G A C G T G A C T G T C A G C T A C A G T A C G T C T G A T G C A G A T C G A C T G T A C C G T A C T G A A C G T A C G T A C G T

PH0045.1_Hoxa1/Jaspar

Match Rank:6
Score:0.53
Offset:-3
Orientation:reverse strand
Alignment:---GTTATTCCTTCMAYAT
ACGGTAATTAGCTCAG---
 A C G T A C G T A C G T A C T G A C G T C G A T C G T A A C G T A C G T G T A C G A T C A C G T A C G T A G T C G T A C C G T A A G T C C G T A A C G T
T C G A T G A C C T A G A C T G A G C T G T C A C G T A A C G T A C G T C T G A T A C G A G T C G A C T G A T C C T G A C T A G A C G T A C G T A C G T

SPIC/MA0687.1/Jaspar

Match Rank:7
Score:0.53
Offset:5
Orientation:reverse strand
Alignment:GTTATTCCTTCMAYAT---
-----TACTTCCTCTTTTN
 A C T G A C G T C G A T C G T A A C G T A C G T G T A C G A T C A C G T A C G T A G T C G T A C C G T A A G T C C G T A A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T C A G T C G T A A G T C A C G T C G A T G T A C T A G C A C G T A T G C C G A T C A G T C A G T G A C T C A G T

Pitx1:Ebox(Homeobox,bHLH)/Hindlimb-Pitx1-ChIP-Seq(GSE41591)/Homer

Match Rank:8
Score:0.53
Offset:0
Orientation:forward strand
Alignment:GTTATTCCTTCMAYAT--
YTAATTRAWWCCAGATGT
 A C T G A C G T C G A T C G T A A C G T A C G T G T A C G A T C A C G T A C G T A G T C G T A C C G T A A G T C C G T A A C G T A C G T A C G T
G A C T C G A T C T G A G T C A G A C T C G A T T C G A C G T A G C T A G C T A T G A C G T A C C G T A A C T G T G C A C G A T A C T G A C G T

NFAT:AP1(RHD,bZIP)/Jurkat-NFATC1-ChIP-Seq(Jolma_et_al.)/Homer

Match Rank:9
Score:0.52
Offset:-4
Orientation:reverse strand
Alignment:----GTTATTCCTTCMAYAT
NTGACTCANTTTTTCCANTN
 A C G T A C G T A C G T A C G T A C T G A C G T C G A T C G T A A C G T A C G T G T A C G A T C A C G T A C G T A G T C G T A C C G T A A G T C C G T A A C G T
T C G A G C A T A C T G C G T A A T G C G C A T G T A C C G T A A G C T G C A T A G C T A G C T G A C T A G C T A G T C A G T C G C T A A G C T G A C T A T G C

PB0031.1_Hoxa3_1/Jaspar

Match Rank:10
Score:0.52
Offset:-1
Orientation:reverse strand
Alignment:-GTTATTCCTTCMAYAT
GTTAATTANCTCNN---
 A C G T A C T G A C G T C G A T C G T A A C G T A C G T G T A C G A T C A C G T A C G T A G T C G T A C C G T A A G T C C G T A A C G T
T C A G A G C T A G C T G T C A C G T A A C G T A C G T C T G A T A G C G A T C C G A T T A G C T G A C G C T A A C G T A C G T A C G T