Information for 17-TGTSATTGTCCCT (Motif 26)

C G A T A T C G C G A T A T C G G C T A G A C T A C G T A C T G C G A T A G T C G A T C G A T C G A C T
Reverse Opposite:
C T G A C A T G C T A G T C A G C G T A T G A C G T C A C T G A C G A T T A G C C G T A A T G C C G T A
p-value:1e-9
log p-value:-2.206e+01
Information Content per bp:1.677
Number of Target Sequences with motif16.0
Percentage of Target Sequences with motif2.14%
Number of Background Sequences with motif125.3
Percentage of Background Sequences with motif0.26%
Average Position of motif in Targets59.1 +/- 20.7bp
Average Position of motif in Background55.0 +/- 29.7bp
Strand Bias (log2 ratio + to - strand density)0.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Sox17/MA0078.1/Jaspar

Match Rank:1
Score:0.59
Offset:1
Orientation:forward strand
Alignment:TGTSATTGTCCCT
-CTCATTGTC---
 C G A T A T C G C G A T A T C G G C T A G A C T A C G T A C T G C G A T A G T C G A T C G A T C G A C T
A C G T G A C T G A C T G A T C C G T A A G C T A C G T A C T G A C G T A T G C A C G T A C G T A C G T

PB0070.1_Sox30_1/Jaspar

Match Rank:2
Score:0.59
Offset:-2
Orientation:reverse strand
Alignment:--TGTSATTGTCCCT-
ANNTCCATTGTTCNNN
 A C G T A C G T C G A T A T C G C G A T A T C G G C T A G A C T A C G T A C T G C G A T A G T C G A T C G A T C G A C T A C G T
C T G A C T G A C A G T C G A T A G T C G T A C G C T A A G C T C A G T T C A G C G A T A G C T T A G C G C T A C G A T G A C T

PB0119.1_Foxa2_2/Jaspar

Match Rank:3
Score:0.59
Offset:-5
Orientation:reverse strand
Alignment:-----TGTSATTGTCCCT
NCNTTTGTTATTTNN---
 A C G T A C G T A C G T A C G T A C G T C G A T A T C G C G A T A T C G G C T A G A C T A C G T A C T G C G A T A G T C G A T C G A T C G A C T
A T G C A T G C A T C G A G C T C A G T C A G T C T A G G C A T G A C T T C G A C A G T G A C T G C A T A G C T A G C T A C G T A C G T A C G T

IRF1/MA0050.2/Jaspar

Match Rank:4
Score:0.58
Offset:-6
Orientation:forward strand
Alignment:------TGTSATTGTCCCT--
TTTTACTTTCACTTTCACTTT
 A C G T A C G T A C G T A C G T A C G T A C G T C G A T A T C G C G A T A T C G G C T A G A C T A C G T A C T G C G A T A G T C G A T C G A T C G A C T A C G T A C G T
G A C T A G C T A G C T A G C T C T G A A T G C C G A T A G C T A G C T A G T C C T G A A T G C G C A T G A C T G A C T A G T C C G T A A G T C G A C T G C A T G A C T

PRDM1/MA0508.1/Jaspar

Match Rank:5
Score:0.58
Offset:2
Orientation:reverse strand
Alignment:TGTSATTGTCCCT----
--TCACTTTCACTTTCN
 C G A T A T C G C G A T A T C G G C T A G A C T A C G T A C T G C G A T A G T C G A T C G A T C G A C T A C G T A C G T A C G T A C G T
A C G T A C G T G A C T G A T C T G C A A G T C G C A T G A C T A C G T A G T C G T C A G A T C A G C T A G C T G A C T G A T C G C A T

PRDM1(Zf)/Hela-PRDM1-ChIP-Seq(GSE31477)/Homer

Match Rank:6
Score:0.57
Offset:4
Orientation:forward strand
Alignment:TGTSATTGTCCCT---
----ACTTTCACTTTC
 C G A T A T C G C G A T A T C G G C T A G A C T A C G T A C T G C G A T A G T C G A T C G A T C G A C T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T T C G A T G A C G C A T A G C T C A G T G A T C G C T A G A T C G A C T A C G T G C A T A G T C

PB0122.1_Foxk1_2/Jaspar

Match Rank:7
Score:0.57
Offset:-3
Orientation:reverse strand
Alignment:---TGTSATTGTCCCT
NNNTGTTGTTGTTNG-
 A C G T A C G T A C G T C G A T A T C G C G A T A T C G G C T A G A C T A C G T A C T G C G A T A G T C G A T C G A T C G A C T
C T G A C A T G C T A G G C A T C T A G G C A T A C G T C T A G A G C T A C G T C T A G G A C T C A G T C G A T C A T G A C G T

AR-halfsite(NR)/LNCaP-AR-ChIP-Seq(GSE27824)/Homer

Match Rank:8
Score:0.57
Offset:5
Orientation:reverse strand
Alignment:TGTSATTGTCCCT--
-----CTGTTCCTGG
 C G A T A T C G C G A T A T C G G C T A G A C T A C G T A C T G C G A T A G T C G A T C G A T C G A C T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T T A G C C G A T A T C G A C G T A C G T A G T C A G T C G C A T C A T G A T C G

RBPJ:Ebox(?,bHLH)/Panc1-Rbpj1-ChIP-Seq(GSE47459)/Homer

Match Rank:9
Score:0.57
Offset:-4
Orientation:reverse strand
Alignment:----TGTSATTGTCCCT
CAKCTGKYCYYTTYCCC
 A C G T A C G T A C G T A C G T C G A T A T C G C G A T A T C G G C T A G A C T A C G T A C T G C G A T A G T C G A T C G A T C G A C T
T G A C G C T A A C G T T G A C C G A T A C T G A C T G A G T C A G T C A G T C A G C T A G C T A G C T A G C T G A T C T G A C G T A C

Sox15(HMG)/CPA-Sox15-ChIP-Seq(GSE62909)/Homer

Match Rank:10
Score:0.56
Offset:1
Orientation:reverse strand
Alignment:TGTSATTGTCCCT
-NCCATTGTTY--
 C G A T A T C G C G A T A T C G G C T A G A C T A C G T A C T G C G A T A G T C G A T C G A T C G A C T
A C G T C T A G A G T C G A T C G C T A C G A T A C G T A T C G A C G T A G C T G A C T A C G T A C G T