Information for 15-CTGGGCTKGCTGTGTT (Motif 23)

G T A C G C A T A C T G C A T G T A C G G T A C G C A T A C G T C T A G A G T C A C G T A C T G C G A T C A T G A C G T A C G T
Reverse Opposite:
G T C A G T C A G T A C G C T A G T A C C G T A T A C G A G T C G T C A C G T A C A T G A G T C G T A C G T A C C G T A A C T G
p-value:1e-10
log p-value:-2.326e+01
Information Content per bp:1.675
Number of Target Sequences with motif10.0
Percentage of Target Sequences with motif1.34%
Number of Background Sequences with motif30.1
Percentage of Background Sequences with motif0.06%
Average Position of motif in Targets47.4 +/- 23.4bp
Average Position of motif in Background52.4 +/- 28.7bp
Strand Bias (log2 ratio + to - strand density)0.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

ZNF416(Zf)/HEK293-ZNF416.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:1
Score:0.63
Offset:-3
Orientation:forward strand
Alignment:---CTGGGCTKGCTGTGTT
WDNCTGGGCA---------
 A C G T A C G T A C G T G T A C G C A T A C T G C A T G T A C G G T A C G C A T A C G T C T A G A G T C A C G T A C T G C G A T C A T G A C G T A C G T
G C A T C T A G G T A C A G T C C G A T A C T G C T A G C T A G G T A C G C T A A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

PB0207.1_Zic3_2/Jaspar

Match Rank:2
Score:0.54
Offset:2
Orientation:reverse strand
Alignment:CTGGGCTKGCTGTGTT-
--NNTCCTGCTGTGNNN
 G T A C G C A T A C T G C A T G T A C G G T A C G C A T A C G T C T A G A G T C A C G T A C T G C G A T C A T G A C G T A C G T A C G T
A C G T A C G T G C A T A T C G C A G T T G A C T G A C G A C T T C A G A G T C C G A T C T A G G A C T A C T G G A T C G C A T G T A C

RUNX-AML(Runt)/CD4+-PolII-ChIP-Seq(Barski_et_al.)/Homer

Match Rank:3
Score:0.54
Offset:8
Orientation:forward strand
Alignment:CTGGGCTKGCTGTGTT--
--------GCTGTGGTTT
 G T A C G C A T A C T G C A T G T A C G G T A C G C A T A C G T C T A G A G T C A C G T A C T G C G A T C A T G A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C T G G A T C G A C T A C T G A C G T C A T G A C T G A C G T A G C T C G A T

POL009.1_DCE_S_II/Jaspar

Match Rank:4
Score:0.54
Offset:8
Orientation:forward strand
Alignment:CTGGGCTKGCTGTGTT
--------GCTGTG--
 G T A C G C A T A C T G C A T G T A C G G T A C G C A T A C G T C T A G A G T C A C G T A C T G C G A T C A T G A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T T A C G T A G C C A G T A T C G G A C T A T C G A C G T A C G T

Pax8(Paired,Homeobox)/Thyroid-Pax8-ChIP-Seq(GSE26938)/Homer

Match Rank:5
Score:0.51
Offset:-2
Orientation:forward strand
Alignment:--CTGGGCTKGCTGTGTT
GTCATGCHTGRCTGS---
 A C G T A C G T G T A C G C A T A C T G C A T G T A C G G T A C G C A T A C G T C T A G A G T C A C G T A C T G C G A T C A T G A C G T A C G T
A C T G A G C T A G T C G T C A A G C T T C A G A T G C G A T C G C A T A T C G T C G A T A G C C G A T C A T G T A G C A C G T A C G T A C G T

Sox4(HMG)/proB-Sox4-ChIP-Seq(GSE50066)/Homer

Match Rank:6
Score:0.51
Offset:8
Orientation:forward strand
Alignment:CTGGGCTKGCTGTGTT--
--------YCTTTGTTCC
 G T A C G C A T A C T G C A T G T A C G G T A C G C A T A C G T C T A G A G T C A C G T A C T G C G A T C A T G A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A G T C A G T C C G A T A C G T A C G T A C T G A C G T A G C T A G T C A G T C

Zic(Zf)/Cerebellum-ZIC1.2-ChIP-Seq(GSE60731)/Homer

Match Rank:7
Score:0.50
Offset:5
Orientation:forward strand
Alignment:CTGGGCTKGCTGTGTT
-----CCTGCTGAGH-
 G T A C G C A T A C T G C A T G T A C G G T A C G C A T A C G T C T A G A G T C A C G T A C T G C G A T C A T G A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A G T C G T A C A G C T C T A G A G T C C G A T A C T G C G T A A C T G G T C A A C G T

PB0205.1_Zic1_2/Jaspar

Match Rank:8
Score:0.50
Offset:2
Orientation:reverse strand
Alignment:CTGGGCTKGCTGTGTT-
--TNTCCTGCTGTGNNG
 G T A C G C A T A C T G C A T G T A C G G T A C G C A T A C G T C T A G A G T C A C G T A C T G C G A T C A T G A C G T A C G T A C G T
A C G T A C G T G C A T A G T C C A G T T G A C G T A C G A C T T C A G A G T C C G A T C T A G A G C T A C T G G C A T C A T G T C A G

RUNX(Runt)/HPC7-Runx1-ChIP-Seq(GSE22178)/Homer

Match Rank:9
Score:0.50
Offset:9
Orientation:reverse strand
Alignment:CTGGGCTKGCTGTGTT---
---------CTGTGGTTTN
 G T A C G C A T A C T G C A T G T A C G G T A C G C A T A C G T C T A G A G T C A C G T A C T G C G A T C A T G A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T G A T C A C G T A C T G A G C T A C T G A C T G A G C T A G C T C G A T A T C G

PB0061.1_Sox11_1/Jaspar

Match Rank:10
Score:0.50
Offset:4
Orientation:reverse strand
Alignment:CTGGGCTKGCTGTGTT-----
----NNNTCCTTTGTTCTNNN
 G T A C G C A T A C T G C A T G T A C G G T A C G C A T A C G T C T A G A G T C A C G T A C T G C G A T C A T G A C G T A C G T A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T C G A T C G T A T C A G A G C T A G T C G A T C C G A T A C G T C G A T A C T G C G A T A G C T G A T C G C A T G C A T T G C A C G A T