Information for 9-GKTTTATRAS (Motif 19)

T C A G C A T G A C G T A G C T A C G T C G T A A G C T C T G A C T G A A T C G
Reverse Opposite:
T A G C G A C T G A C T C T G A A C G T T G C A C T G A C G T A G T A C A G T C
p-value:1e-11
log p-value:-2.558e+01
Information Content per bp:1.671
Number of Target Sequences with motif37.0
Percentage of Target Sequences with motif4.94%
Number of Background Sequences with motif618.6
Percentage of Background Sequences with motif1.28%
Average Position of motif in Targets47.9 +/- 27.9bp
Average Position of motif in Background48.9 +/- 29.5bp
Strand Bias (log2 ratio + to - strand density)0.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

CDX4(Homeobox)/ZebrafishEmbryos-Cdx4.Myc-ChIP-Seq(GSE48254)/Homer

Match Rank:1
Score:0.90
Offset:-1
Orientation:reverse strand
Alignment:-GKTTTATRAS-
DGWTTTATGRCN
 A C G T T C A G C A T G A C G T A G C T A C G T C G T A A G C T C T G A C T G A A T C G A C G T
C A G T C A T G G C A T C G A T C G A T C G A T C T G A A G C T C A T G C T A G A G T C A T G C

HOXD13(Homeobox)/Chicken-Hoxd13-ChIP-Seq(GSE38910)/Homer

Match Rank:2
Score:0.86
Offset:1
Orientation:reverse strand
Alignment:GKTTTATRAS-
-TTTTATTRGN
 T C A G C A T G A C G T A G C T A C G T C G T A A G C T C T G A C T G A A T C G A C G T
A C G T C G A T A C G T A C G T C G A T C G T A G C A T C A G T C T G A A T C G G C T A

CDX1/MA0878.1/Jaspar

Match Rank:3
Score:0.85
Offset:1
Orientation:reverse strand
Alignment:GKTTTATRAS
-TTTTATTGC
 T C A G C A T G A C G T A G C T A C G T C G T A A G C T C T G A C T G A A T C G
A C G T C A G T C G A T G C A T C G A T C G T A A G C T C A G T C T A G A G T C

HOXD13/MA0909.1/Jaspar

Match Rank:4
Score:0.85
Offset:0
Orientation:reverse strand
Alignment:GKTTTATRAS
NTTTTATTGG
 T C A G C A T G A C G T A G C T A C G T C G T A A G C T C T G A C T G A A T C G
C A G T C A G T A C G T C G A T C G A T C T G A G C A T C A G T C T A G T A C G

Cdx2(Homeobox)/mES-Cdx2-ChIP-Seq(GSE14586)/Homer

Match Rank:5
Score:0.84
Offset:0
Orientation:reverse strand
Alignment:GKTTTATRAS
NTTTTATGAC
 T C A G C A T G A C G T A G C T A C G T C G T A A G C T C T G A C T G A A T C G
C T G A C G A T A C G T A C G T A C G T C G T A A C G T C A T G C T G A A G T C

HOXB13(Homeobox)/ProstateTumor-HOXB13-ChIP-Seq(GSE56288)/Homer

Match Rank:6
Score:0.84
Offset:1
Orientation:forward strand
Alignment:GKTTTATRAS-
-TTTTATKRGG
 T C A G C A T G A C G T A G C T A C G T C G T A A G C T C T G A C T G A A T C G A C G T
A C G T C G A T A C G T A C G T A C G T C G T A A G C T C A G T C T A G A T C G A C T G

HOXA13/MA0650.1/Jaspar

Match Rank:7
Score:0.83
Offset:0
Orientation:reverse strand
Alignment:GKTTTATRAS
TTTTTATTGG
 T C A G C A T G A C G T A G C T A C G T C G T A A G C T C T G A C T G A A T C G
C A G T A C G T A C G T C G A T C G A T C G T A C G A T C A G T T C A G A T C G

HOXA10/MA0899.1/Jaspar

Match Rank:8
Score:0.83
Offset:0
Orientation:reverse strand
Alignment:GKTTTATRAS-
NTTTTATTACN
 T C A G C A T G A C G T A G C T A C G T C G T A A G C T C T G A C T G A A T C G A C G T
C A G T C A G T C A G T G C A T G C A T C G T A A G C T A C G T C T G A A G T C G A T C

HOXB13/MA0901.1/Jaspar

Match Rank:9
Score:0.82
Offset:0
Orientation:reverse strand
Alignment:GKTTTATRAS
NTTTTATTGG
 T C A G C A T G A C G T A G C T A C G T C G T A A G C T C T G A C T G A A T C G
C A T G C A G T C A G T C G A T G C A T C T G A G C A T C A G T C T A G A T C G

CDX2/MA0465.1/Jaspar

Match Rank:10
Score:0.81
Offset:1
Orientation:reverse strand
Alignment:GKTTTATRAS--
-TTTTATGGCTN
 T C A G C A T G A C G T A G C T A C G T C G T A A G C T C T G A C T G A A T C G A C G T A C G T
A C G T A G C T A C G T A C G T A C G T C G T A A C G T C A T G C T A G A G T C G A C T A G C T