Information for 6-WGCTAATAAATAATAA (Motif 11)

C G A T A C T G A G T C A C G T T G C A C T G A G A C T C G T A T C G A C G T A A C G T C G T A G C T A A G C T T G C A C G T A
Reverse Opposite:
A C G T A C G T T C G A C A G T A C G T T C G A A C G T A G C T A C G T C T G A A G C T A C G T C G T A A C T G A G T C G C T A
p-value:1e-11
log p-value:-2.748e+01
Information Content per bp:1.746
Number of Target Sequences with motif6.0
Percentage of Target Sequences with motif0.80%
Number of Background Sequences with motif2.6
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets53.7 +/- 27.5bp
Average Position of motif in Background27.3 +/- 10.4bp
Strand Bias (log2 ratio + to - strand density)-1.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0093.1_Zfp105_1/Jaspar

Match Rank:1
Score:0.60
Offset:4
Orientation:forward strand
Alignment:WGCTAATAAATAATAA---
----AACAAACAACAAGAG
 C G A T A C T G A G T C A C G T T G C A C T G A G A C T C G T A T C G A C G T A A C G T C G T A G C T A A G C T T G C A C G T A A C G T A C G T A C G T
A C G T A C G T A C G T A C G T G C T A C G T A G A T C G T C A C G T A G C T A G A T C C T G A C G T A G T A C C T G A G C T A C A T G C G T A C T A G

PH0068.1_Hoxc13/Jaspar

Match Rank:2
Score:0.59
Offset:-2
Orientation:forward strand
Alignment:--WGCTAATAAATAATAA
AAAGCTCGTAAAATTT--
 A C G T A C G T C G A T A C T G A G T C A C G T T G C A C T G A G A C T C G T A T C G A C G T A A C G T C G T A G C T A A G C T T G C A C G T A
G C A T G C T A C G T A A C T G T A G C A G C T G A T C C T A G A G C T C G T A C G T A C G T A G C T A G C A T A G C T C G A T A C G T A C G T

Foxq1/MA0040.1/Jaspar

Match Rank:3
Score:0.57
Offset:4
Orientation:reverse strand
Alignment:WGCTAATAAATAATAA
----AATAAACAATN-
 C G A T A C T G A G T C A C G T T G C A C T G A G A C T C G T A T C G A C G T A A C G T C G T A G C T A A G C T T G C A C G T A
A C G T A C G T A C G T A C G T G C T A T G C A A G C T C G T A C G T A C G T A A G T C C G T A C G T A A G C T C G T A A C G T

PH0048.1_Hoxa13/Jaspar

Match Rank:4
Score:0.57
Offset:-2
Orientation:forward strand
Alignment:--WGCTAATAAATAATAA
AAACCTCGTAAAATTT--
 A C G T A C G T C G A T A C T G A G T C A C G T T G C A C T G A G A C T C G T A T C G A C G T A A C G T C G T A G C T A A G C T T G C A C G T A
G C T A C G T A G C T A A T C G T A G C A G C T G A T C C T A G A G C T C G T A C G T A G C T A G C T A G C A T A C G T C G A T A C G T A C G T

HOXC13/MA0907.1/Jaspar

Match Rank:5
Score:0.55
Offset:1
Orientation:forward strand
Alignment:WGCTAATAAATAATAA
-GCTCGTAAAAA----
 C G A T A C T G A G T C A C G T T G C A C T G A G A C T C G T A T C G A C G T A A C G T C G T A G C T A A G C T T G C A C G T A
A C G T A C T G T A G C A G C T G A T C C T A G A C G T C G T A G C T A C G T A G C T A G C T A A C G T A C G T A C G T A C G T

PB0119.1_Foxa2_2/Jaspar

Match Rank:6
Score:0.55
Offset:5
Orientation:forward strand
Alignment:WGCTAATAAATAATAA----
-----AAAAATAACAAACGG
 C G A T A C T G A G T C A C G T T G C A C T G A G A C T C G T A T C G A C G T A A C G T C G T A G C T A A G C T T G C A C G T A A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T T C G A T C G A C G T A C G T A G T C A A C G T C T G A C G T A G A T C G T C A G C T A C T G A T A G C T A C G A T C G

PB0186.1_Tcf3_2/Jaspar

Match Rank:7
Score:0.55
Offset:-1
Orientation:forward strand
Alignment:-WGCTAATAAATAATAA
AGCCGAAAAAAAAAT--
 A C G T C G A T A C T G A G T C A C G T T G C A C T G A G A C T C G T A T C G A C G T A A C G T C G T A G C T A A G C T T G C A C G T A
C T G A T A C G A T G C T A G C A C T G C G T A C T G A G C T A G C T A G C T A T G C A G C T A T C G A G C T A G C A T A C G T A C G T

OCT:OCT(POU,Homeobox)/NPC-Brn1-ChIP-Seq(GSE35496)/Homer

Match Rank:8
Score:0.54
Offset:2
Orientation:reverse strand
Alignment:WGCTAATAAATAATAA-
--CTCATGAATATTCAT
 C G A T A C T G A G T C A C G T T G C A C T G A G A C T C G T A T C G A C G T A A C G T C G T A G C T A A G C T T G C A C G T A A C G T
A C G T A C G T T A G C G A C T G A T C C G T A A C G T T C A G G T C A C G T A A C G T C G T A C G A T A C G T A G T C C G T A C G A T

PB0116.1_Elf3_2/Jaspar

Match Rank:9
Score:0.54
Offset:1
Orientation:forward strand
Alignment:WGCTAATAAATAATAA--
-GTTCAAAAAAAAAATTC
 C G A T A C T G A G T C A C G T T G C A C T G A G A C T C G T A T C G A C G T A A C G T C G T A G C T A A G C T T G C A C G T A A C G T A C G T
A C G T C A T G A G C T A C G T G T A C G T C A C G T A G C T A G C T A G C T A G C T A G C T A G C T A G C T A G T C A G A C T C G A T G A T C

POL010.1_DCE_S_III/Jaspar

Match Rank:10
Score:0.54
Offset:0
Orientation:reverse strand
Alignment:WGCTAATAAATAATAA
NGCTN-----------
 C G A T A C T G A G T C A C G T T G C A C T G A G A C T C G T A T C G A C G T A A C G T C G T A G C T A A G C T T G C A C G T A
T A C G A C T G A G T C A C G T A T C G A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T