Information for 3-GAAGTGWACTTTC (Motif 6)

T C A G T G C A C T G A A C T G A C G T A T C G C G A T G T C A A G T C A C G T A G C T A C G T A G T C
Reverse Opposite:
C T A G C G T A C T G A C G T A T A C G A C G T C G T A A T G C C G T A A G T C A G C T A C G T A G T C
p-value:1e-13
log p-value:-2.997e+01
Information Content per bp:1.752
Number of Target Sequences with motif8.0
Percentage of Target Sequences with motif1.11%
Number of Background Sequences with motif6.6
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets65.8 +/- 24.7bp
Average Position of motif in Background58.5 +/- 14.9bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0134.1_Hnf4a_2/Jaspar

Match Rank:1
Score:0.71
Offset:0
Orientation:reverse strand
Alignment:GAAGTGWACTTTC---
NNATTGGACTTTNGNN
 T C A G T G C A C T G A A C T G A C G T A T C G C G A T G T C A A G T C A C G T A G C T A C G T A G T C A C G T A C G T A C G T
C G A T C A G T G C T A C A G T G A C T C T A G C A T G G T C A G T A C A G C T G A C T G C A T C A G T C T A G T G A C T G A C

PB0053.1_Rara_1/Jaspar

Match Rank:2
Score:0.64
Offset:0
Orientation:reverse strand
Alignment:GAAGTGWACTTTC---
NNNGTGACCTTTGNNN
 T C A G T G C A C T G A A C T G A C G T A T C G C G A T G T C A A G T C A C G T A G C T A C G T A G T C A C G T A C G T A C G T
G T A C C G T A A T C G C T A G A G C T T C A G G T C A G T A C G T A C A G C T A G C T C G A T C A T G T C G A C A T G G T C A

Nur77(NR)/K562-NR4A1-ChIP-Seq(GSE31363)/Homer

Match Rank:3
Score:0.62
Offset:4
Orientation:forward strand
Alignment:GAAGTGWACTTTC---
----TGACCTTTNCNT
 T C A G T G C A C T G A A C T G A C G T A T C G C G A T G T C A A G T C A C G T A G C T A C G T A G T C A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T C T A G C G T A A G T C G T A C A C G T A C G T A C G T G T C A G T A C T G A C G A C T

NR4A2/MA0160.1/Jaspar

Match Rank:4
Score:0.62
Offset:3
Orientation:reverse strand
Alignment:GAAGTGWACTTTC
---GTGACCTT--
 T C A G T G C A C T G A A C T G A C G T A T C G C G A T G T C A A G T C A C G T A G C T A C G T A G T C
A C G T A C G T A C G T A C T G A C G T C T A G C G T A A G T C G T A C A G C T A G C T A C G T A C G T

HNF4a(NR),DR1/HepG2-HNF4a-ChIP-Seq(GSE25021)/Homer

Match Rank:5
Score:0.60
Offset:4
Orientation:reverse strand
Alignment:GAAGTGWACTTTC-------
----TGGACTTTGNNCTNTG
 T C A G T G C A C T G A A C T G A C G T A T C G C G A T G T C A A G T C A C G T A G C T A C G T A G T C A C G T A C G T A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T C G A T C T A G T C A G G T C A G T A C G A C T A G C T A C G T C T A G T C G A G T A C G A T C G A C T A G T C C G A T C A T G

HNF4G/MA0484.1/Jaspar

Match Rank:6
Score:0.59
Offset:4
Orientation:reverse strand
Alignment:GAAGTGWACTTTC------
----TGGACTTTGNNCTCN
 T C A G T G C A C T G A A C T G A C G T A T C G C G A T G T C A A G T C A C G T A G C T A C G T A G T C A C G T A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T C G A T C T A G T C A G G T C A G T A C G A C T A G C T A C G T T C A G T C A G G T C A G A T C G A C T A G T C G C A T

PRDM1(Zf)/Hela-PRDM1-ChIP-Seq(GSE31477)/Homer

Match Rank:7
Score:0.59
Offset:7
Orientation:forward strand
Alignment:GAAGTGWACTTTC------
-------ACTTTCACTTTC
 T C A G T G C A C T G A A C T G A C G T A T C G C G A T G T C A A G T C A C G T A G C T A C G T A G T C A C G T A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T T C G A T G A C G C A T A G C T C A G T G A T C G C T A G A T C G A C T A C G T G C A T A G T C

PB0049.1_Nr2f2_1/Jaspar

Match Rank:8
Score:0.58
Offset:0
Orientation:reverse strand
Alignment:GAAGTGWACTTTC---
NNNNTGACCTTTNNNN
 T C A G T G C A C T G A A C T G A C G T A T C G C G A T G T C A A G T C A C G T A G C T A C G T A G T C A C G T A C G T A C G T
A G T C C G A T A T G C C A T G A G C T T C A G G T C A G T A C G T A C A G C T A G C T G C A T C A T G T C G A C A T G G T C A

NKX2-8/MA0673.1/Jaspar

Match Rank:9
Score:0.58
Offset:-2
Orientation:reverse strand
Alignment:--GAAGTGWACTTTC
NTCAAGTGG------
 A C G T A C G T T C A G T G C A C T G A A C T G A C G T A T C G C G A T G T C A A G T C A C G T A G C T A C G T A G T C
A G C T C G A T A T G C C T G A C T G A C T A G C A G T C T A G A T C G A C G T A C G T A C G T A C G T A C G T A C G T

PB0146.1_Mafk_2/Jaspar

Match Rank:10
Score:0.58
Offset:1
Orientation:reverse strand
Alignment:GAAGTGWACTTTC---
-CCTTGCAATTTTTNN
 T C A G T G C A C T G A A C T G A C G T A T C G C G A T G T C A A G T C A C G T A G C T A C G T A G T C A C G T A C G T A C G T
A C G T A G T C T A G C C A G T A C G T C T A G G T A C C T G A G T C A C G A T C G A T G A C T G A C T A G C T C A G T A G T C