Information for 23-ACARCASWARATT (Motif 41)

C G T A A G T C C G T A C T G A A G T C C G T A A T C G C G A T C T G A C T G A C G T A A C G T A C G T
Reverse Opposite:
C G T A G T C A A C G T A G C T A G C T C G T A A T G C A C G T A C T G A G C T A C G T A C T G A C G T
p-value:1e-8
log p-value:-1.891e+01
Information Content per bp:1.875
Number of Target Sequences with motif5.0
Percentage of Target Sequences with motif0.69%
Number of Background Sequences with motif4.7
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets41.5 +/- 27.2bp
Average Position of motif in Background30.5 +/- 2.1bp
Strand Bias (log2 ratio + to - strand density)1.0
Multiplicity (# of sites on avg that occur together)1.20
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

EWS:ERG-fusion(ETS)/CADO_ES1-EWS:ERG-ChIP-Seq(SRA014231)/Homer

Match Rank:1
Score:0.58
Offset:2
Orientation:reverse strand
Alignment:ACARCASWARATT
--NACAGGAAAT-
 C G T A A G T C C G T A C T G A A G T C C G T A A T C G C G A T C T G A C T G A C G T A A C G T A C G T
A C G T A C G T T A G C C T G A T A G C G T C A A C T G A C T G C G T A C G T A C T G A A G C T A C G T

PB0120.1_Foxj1_2/Jaspar

Match Rank:2
Score:0.57
Offset:-5
Orientation:forward strand
Alignment:-----ACARCASWARATT
ATGTCACAACAACAC---
 A C G T A C G T A C G T A C G T A C G T C G T A A G T C C G T A C T G A A G T C C G T A A T C G C G A T C T G A C T G A C G T A A C G T A C G T
C G T A A G C T T C A G A C G T T A G C T C G A A G T C C T G A G T C A T G A C C G T A C T G A A T G C T C G A G T A C A C G T A C G T A C G T

EWS:FLI1-fusion(ETS)/SK_N_MC-EWS:FLI1-ChIP-Seq(SRA014231)/Homer

Match Rank:3
Score:0.56
Offset:2
Orientation:forward strand
Alignment:ACARCASWARATT
--NACAGGAAAT-
 C G T A A G T C C G T A C T G A A G T C C G T A A T C G C G A T C T G A C T G A C G T A A C G T A C G T
A C G T A C G T T G C A C T G A A G T C G T C A A C T G A C T G C G T A C G T A C T G A A G C T A C G T

PB0122.1_Foxk1_2/Jaspar

Match Rank:4
Score:0.56
Offset:-6
Orientation:forward strand
Alignment:------ACARCASWARATT
CAAACAACAACACCT----
 A C G T A C G T A C G T A C G T A C G T A C G T C G T A A G T C C G T A C T G A A G T C C G T A A T C G C G A T C T G A C T G A C G T A A C G T A C G T
G T A C G C T A G T C A C T G A G A T C T G C A T C G A A G T C T C G A C G T A G A T C C G T A G A T C G T A C G A C T A C G T A C G T A C G T A C G T

PB0205.1_Zic1_2/Jaspar

Match Rank:5
Score:0.54
Offset:-4
Orientation:forward strand
Alignment:----ACARCASWARATT
CCACACAGCAGGAGA--
 A C G T A C G T A C G T A C G T C G T A A G T C C G T A C T G A A G T C C G T A A T C G C G A T C T G A C T G A C G T A A C G T A C G T
A G T C G T A C C G T A T G A C T C G A A G T C G C T A C T A G A G T C C T G A A C T G A C T G G T C A T C A G C G T A A C G T A C G T

PB0207.1_Zic3_2/Jaspar

Match Rank:6
Score:0.53
Offset:-4
Orientation:forward strand
Alignment:----ACARCASWARATT
GAGCACAGCAGGACA--
 A C G T A C G T A C G T A C G T C G T A A G T C C G T A C T G A A G T C C G T A A T C G C G A T C T G A C T G A C G T A A C G T A C G T
C A T G C G T A C T A G T G A C C T G A A G T C C G T A C T A G A G T C C T G A A C T G A C T G G T C A T A G C C G T A A C G T A C G T

PB0171.1_Sox18_2/Jaspar

Match Rank:7
Score:0.53
Offset:3
Orientation:forward strand
Alignment:ACARCASWARATT------
---GGACTGAATTCATGCC
 C G T A A G T C C G T A C T G A A G T C C G T A A T C G C G A T C T G A C T G A C G T A A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T C T A G A C T G C T G A A T G C A G C T C T A G G T C A C T G A G A C T C A G T G A T C T C G A C G A T C T A G G T A C T G A C

PB0063.1_Sox13_1/Jaspar

Match Rank:8
Score:0.53
Offset:-3
Orientation:forward strand
Alignment:---ACARCASWARATT
TTAAGAACAATAAATT
 A C G T A C G T A C G T C G T A A G T C C G T A C T G A A G T C C G T A A T C G C G A T C T G A C T G A C G T A A C G T A C G T
C G A T G A C T C G T A C T G A C A T G C T G A C G T A G A T C C G T A C T G A G C A T C G T A C G T A C G A T G C A T G C A T

PB0074.1_Sox8_1/Jaspar

Match Rank:9
Score:0.53
Offset:-3
Orientation:reverse strand
Alignment:---ACARCASWARATT-
TNNAGAACAATANATNN
 A C G T A C G T A C G T C G T A A G T C C G T A C T G A A G T C C G T A A T C G C G A T C T G A C T G A C G T A A C G T A C G T A C G T
G C A T G C T A G T C A C G T A C A T G C T G A C G T A A G T C C G T A C T G A C G A T C G T A T C A G G C T A G C A T G T C A G T A C

Unknown-ESC-element(?)/mES-Nanog-ChIP-Seq(GSE11724)/Homer

Match Rank:10
Score:0.52
Offset:-1
Orientation:forward strand
Alignment:-ACARCASWARATT
CACAGCAGGGGG--
 A C G T C G T A A G T C C G T A C T G A A G T C C G T A A T C G C G A T C T G A C T G A C G T A A C G T A C G T
T G A C G C T A T G A C C G T A T C A G G A T C C G T A C A T G C A T G C T A G C T A G C T A G A C G T A C G T