Information for 19-AGTGTGTTACAGGSTG (Motif 38)

C G T A C T A G A G C T C T A G C A G T A C T G A C G T A C G T C G T A A G T C C G T A A C T G A C T G T A C G G A C T C T A G
Reverse Opposite:
A G T C C G T A A T G C T G A C A G T C A C G T C T A G C G A T C G T A T G C A A G T C G C T A A G T C T C G A A G T C A C G T
p-value:1e-8
log p-value:-2.033e+01
Information Content per bp:1.740
Number of Target Sequences with motif5.0
Percentage of Target Sequences with motif0.69%
Number of Background Sequences with motif3.2
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets41.2 +/- 24.0bp
Average Position of motif in Background46.0 +/- 3.0bp
Strand Bias (log2 ratio + to - strand density)1.0
Multiplicity (# of sites on avg that occur together)1.20
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PBX1(Homeobox)/MCF7-PBX1-ChIP-Seq(GSE28007)/Homer

Match Rank:1
Score:0.55
Offset:2
Orientation:reverse strand
Alignment:AGTGTGTTACAGGSTG
--TGAGTGACAGSC--
 C G T A C T A G A G C T C T A G C A G T A C T G A C G T A C G T C G T A A G T C C G T A A C T G A C T G T A C G G A C T C T A G
A C G T A C G T C G A T A T C G T C G A A C T G C G A T A T C G C T G A A G T C C G T A A T C G T A C G G A T C A C G T A C G T

Spz1/MA0111.1/Jaspar

Match Rank:2
Score:0.54
Offset:2
Orientation:forward strand
Alignment:AGTGTGTTACAGGSTG
--AGGGTAACAGC---
 C G T A C T A G A G C T C T A G C A G T A C T G A C G T A C G T C G T A A G T C C G T A A C T G A C T G T A C G G A C T C T A G
A C G T A C G T C T G A A T C G C T A G A C T G C A G T C G T A C G T A T A G C C T G A A C T G T A G C A C G T A C G T A C G T

ZNF165(Zf)/WHIM12-ZNF165-ChIP-Seq(GSE65937)/Homer

Match Rank:3
Score:0.53
Offset:0
Orientation:forward strand
Alignment:AGTGTGTTACAGGSTG
AAGGKGRCGCAGGCA-
 C G T A C T A G A G C T C T A G C A G T A C T G A C G T A C G T C G T A A G T C C G T A A C T G A C T G T A C G G A C T C T A G
T G C A C G T A A C T G T C A G C A G T C A T G T C A G G A T C T A C G A G T C T G C A A C T G A C T G T G A C G T C A A C G T

DMRT3/MA0610.1/Jaspar

Match Rank:4
Score:0.53
Offset:2
Orientation:reverse strand
Alignment:AGTGTGTTACAGGSTG
--NTTGATACATT---
 C G T A C T A G A G C T C T A G C A G T A C T G A C G T A C G T C G T A A G T C C G T A A C T G A C T G T A C G G A C T C T A G
A C G T A C G T C G T A C G A T A C G T A C T G G C T A A C G T C G T A A G T C C G T A C G A T A C G T A C G T A C G T A C G T

IRF4(IRF)/GM12878-IRF4-ChIP-Seq(GSE32465)/Homer

Match Rank:5
Score:0.52
Offset:3
Orientation:reverse strand
Alignment:AGTGTGTTACAGGSTG
---TGGTTTCAGT---
 C G T A C T A G A G C T C T A G C A G T A C T G A C G T A C G T C G T A A G T C C G T A A C T G A C T G T A C G G A C T C T A G
A C G T A C G T A C G T G A C T C T A G T A C G C G A T G C A T A C G T T A G C T C G A A T C G C G A T A C G T A C G T A C G T

Pbx3(Homeobox)/GM12878-PBX3-ChIP-Seq(GSE32465)/Homer

Match Rank:6
Score:0.50
Offset:1
Orientation:reverse strand
Alignment:AGTGTGTTACAGGSTG
-NTGATTGACAGN---
 C G T A C T A G A G C T C T A G C A G T A C T G A C G T A C G T C G T A A G T C C G T A A C T G A C T G T A C G G A C T C T A G
A C G T A C G T C G A T A T C G C G T A A C G T C A G T A C T G C T G A A G T C C T G A A T C G A T C G A C G T A C G T A C G T

POL009.1_DCE_S_II/Jaspar

Match Rank:7
Score:0.50
Offset:7
Orientation:reverse strand
Alignment:AGTGTGTTACAGGSTG
-------CACAGN---
 C G T A C T A G A G C T C T A G C A G T A C T G A C G T A C G T C G T A A G T C C G T A A C T G A C T G T A C G G A C T C T A G
A C G T A C G T A C G T A C G T A C G T A C G T A C G T T A G C C T G A T A G C G T C A A C T G A T G C A C G T A C G T A C G T

bZIP:IRF(bZIP,IRF)/Th17-BatF-ChIP-Seq(GSE39756)/Homer

Match Rank:8
Score:0.50
Offset:3
Orientation:forward strand
Alignment:AGTGTGTTACAGGSTG-----
---NAGTTTCABTHTGACTNW
 C G T A C T A G A G C T C T A G C A G T A C T G A C G T A C G T C G T A A G T C C G T A A C T G A C T G T A C G G A C T C T A G A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A G T C C T G A A T C G A G C T A G C T G A C T A G T C G C T A A C G T C G A T G C A T C G A T A T C G C G T A T A G C G C A T A T G C C G T A

Tbr1(T-box)/Cortex-Tbr1-ChIP-Seq(GSE71384)/Homer

Match Rank:9
Score:0.48
Offset:0
Orientation:forward strand
Alignment:AGTGTGTTACAGGSTG
AAGGTGTKAA------
 C G T A C T A G A G C T C T A G C A G T A C T G A C G T A C G T C G T A A G T C C G T A A C T G A C T G T A C G G A C T C T A G
C T G A C T G A C A T G A T C G A G C T A T C G G A C T C A T G C T G A G T C A A C G T A C G T A C G T A C G T A C G T A C G T

POL007.1_BREd/Jaspar

Match Rank:10
Score:0.48
Offset:1
Orientation:forward strand
Alignment:AGTGTGTTACAGGSTG
-GTTTGTT--------
 C G T A C T A G A G C T C T A G C A G T A C T G A C G T A C G T C G T A A G T C C G T A A C T G A C T G T A C G G A C T C T A G
A C G T C T A G A C G T C A G T A C G T A C T G A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T