Information for 18-CWRKTCTGCTTGK (Motif 35)

A G T C C G A T C T G A C A G T A C G T G T A C A C G T A C T G A G T C A C G T A C G T A C T G A C T G
Reverse Opposite:
G T A C A G T C C G T A C G T A A C T G A G T C C G T A A C T G G T C A G T C A A G C T C G T A C T A G
p-value:1e-8
log p-value:-2.070e+01
Information Content per bp:1.858
Number of Target Sequences with motif7.0
Percentage of Target Sequences with motif0.97%
Number of Background Sequences with motif12.3
Percentage of Background Sequences with motif0.03%
Average Position of motif in Targets44.4 +/- 18.0bp
Average Position of motif in Background48.3 +/- 20.1bp
Strand Bias (log2 ratio + to - strand density)0.4
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Dux/MA0611.1/Jaspar

Match Rank:1
Score:0.59
Offset:5
Orientation:reverse strand
Alignment:CWRKTCTGCTTGK
-----TTGATTGN
 A G T C C G A T C T G A C A G T A C G T G T A C A C G T A C T G A G T C A C G T A C G T A C T G A C T G
A C G T A C G T A C G T A C G T A C G T G A C T A C G T A C T G C G T A A C G T A C G T C T A G A T C G

NFYB/MA0502.1/Jaspar

Match Rank:2
Score:0.59
Offset:5
Orientation:reverse strand
Alignment:CWRKTCTGCTTGK-------
-----CTGATTGGTCNATTT
 A G T C C G A T C T G A C A G T A C G T G T A C A C G T A C T G A G T C A C G T A C G T A C T G A C T G A C G T A C G T A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A T G C A G C T A T C G C G T A A G C T A C G T A C T G A C T G G A C T A G T C T A G C T C G A C A G T C A G T A G C T

NFYA/MA0060.2/Jaspar

Match Rank:3
Score:0.59
Offset:-1
Orientation:forward strand
Alignment:-CWRKTCTGCTTGK----
AGAGTGCTGATTGGTCCA
 A C G T A G T C C G A T C T G A C A G T A C G T G T A C A C G T A C T G A G T C A C G T A C G T A C T G A C T G A C G T A C G T A C G T A C G T
G C T A C A T G T G C A T A C G G A C T A C T G A G T C A G C T A T C G C T G A A G C T C G A T T C A G T A C G G A C T A G T C T A G C T C G A

Ahr::Arnt/MA0006.1/Jaspar

Match Rank:4
Score:0.56
Offset:6
Orientation:forward strand
Alignment:CWRKTCTGCTTGK
------TGCGTG-
 A G T C C G A T C T G A C A G T A C G T G T A C A C G T A C T G A G T C A C G T A C G T A C T G A C T G
A C G T A C G T A C G T A C G T A C G T A C G T G A C T A C T G A G T C A C T G A C G T A C T G A C G T

NFY(CCAAT)/Promoter/Homer

Match Rank:5
Score:0.53
Offset:5
Orientation:reverse strand
Alignment:CWRKTCTGCTTGK--
-----CCGATTGGCT
 A G T C C G A T C T G A C A G T A C G T G T A C A C G T A C T G A G T C A C G T A C G T A C T G A C T G A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A T G C A G T C A T C G C G T A A C G T A C G T A C T G A C T G G A T C A G C T

PB0208.1_Zscan4_2/Jaspar

Match Rank:6
Score:0.52
Offset:-3
Orientation:reverse strand
Alignment:---CWRKTCTGCTTGK
NNNNTTGTGTGCTTNN
 A C G T A C G T A C G T A G T C C G A T C T G A C A G T A C G T G T A C A C G T A C T G A G T C A C G T A C G T A C T G A C T G
A G C T C G T A C G A T C A G T C A G T C G A T C T A G A G C T A C T G C G A T A C T G A G T C A G C T C G A T A T G C C A T G

Arnt:Ahr(bHLH)/MCF7-Arnt-ChIP-Seq(Lo_et_al.)/Homer

Match Rank:7
Score:0.52
Offset:5
Orientation:reverse strand
Alignment:CWRKTCTGCTTGK--
-----TTGCGTGCVA
 A G T C C G A T C T G A C A G T A C G T G T A C A C G T A C T G A G T C A C G T A C G T A C T G A C T G A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T C A G T A C T G A G T C T C A G C G A T C A T G G T A C T A G C C G T A

Smad4(MAD)/ESC-SMAD4-ChIP-Seq(GSE29422)/Homer

Match Rank:8
Score:0.52
Offset:-1
Orientation:forward strand
Alignment:-CWRKTCTGCTTGK
VBSYGTCTGG----
 A C G T A G T C C G A T C T G A C A G T A C G T G T A C A C G T A C T G A G T C A C G T A C G T A C T G A C T G
T A C G A T C G T A G C G A T C A C T G A C G T A G T C A C G T C T A G A T C G A C G T A C G T A C G T A C G T

SpiB(ETS)/OCILY3-SPIB-ChIP-Seq(GSE56857)/Homer

Match Rank:9
Score:0.52
Offset:0
Orientation:reverse strand
Alignment:CWRKTCTGCTTGK
CACTTCCYCTTT-
 A G T C C G A T C T G A C A G T A C G T G T A C A C G T A C T G A G T C A C G T A C G T A C T G A C T G
T A G C T C G A A T G C A C G T A C G T A G T C A G T C A G C T G A T C G C A T G A C T G C A T A C G T

Smad3(MAD)/NPC-Smad3-ChIP-Seq(GSE36673)/Homer

Match Rank:10
Score:0.51
Offset:1
Orientation:forward strand
Alignment:CWRKTCTGCTTGK
-TWGTCTGV----
 A G T C C G A T C T G A C A G T A C G T G T A C A C G T A C T G A G T C A C G T A C G T A C T G A C T G
A C G T A G C T G C A T A C T G A C G T A G T C A C G T C T A G T A C G A C G T A C G T A C G T A C G T