Information for 17-TTCTGGTGGCTTGCCA (Motif 31)

A G C T A G C T A G T C A C G T A C T G A C T G C G A T A C T G C T A G A G T C A G C T C G A T A C T G A G T C A G T C C G T A
Reverse Opposite:
A C G T A C T G A C T G G T A C C G T A C T G A A C T G A G T C A G T C G C T A A G T C A G T C C G T A A C T G C T G A C T G A
p-value:1e-9
log p-value:-2.235e+01
Information Content per bp:1.913
Number of Target Sequences with motif5.0
Percentage of Target Sequences with motif0.69%
Number of Background Sequences with motif2.3
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets43.4 +/- 25.2bp
Average Position of motif in Background39.7 +/- 13.7bp
Strand Bias (log2 ratio + to - strand density)0.6
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Tlx?(NR)/NPC-H3K4me1-ChIP-Seq(GSE16256)/Homer

Match Rank:1
Score:0.63
Offset:2
Orientation:forward strand
Alignment:TTCTGGTGGCTTGCCA
--CTGGCAGNCTGCCA
 A G C T A G C T A G T C A C G T A C T G A C T G C G A T A C T G C T A G A G T C A G C T C G A T A C T G A G T C A G T C C G T A
A C G T A C G T A G T C C G A T A C T G A T C G T G A C G C T A C A T G A T C G T G A C C G A T A C T G T A G C G T A C G T C A

NF1(CTF)/LNCAP-NF1-ChIP-Seq(Unpublished)/Homer

Match Rank:2
Score:0.60
Offset:1
Orientation:forward strand
Alignment:TTCTGGTGGCTTGCCA-
-CTTGGCANNNTGCCAA
 A G C T A G C T A G T C A C G T A C T G A C T G C G A T A C T G C T A G A G T C A G C T C G A T A C T G A G T C A G T C C G T A A C G T
A C G T A G T C G A C T C A G T A C T G C T A G T G A C G C T A A T G C G C A T A T C G C G A T A C T G G A T C G T A C G T C A C T G A

NFIC::TLX1/MA0119.1/Jaspar

Match Rank:3
Score:0.57
Offset:3
Orientation:forward strand
Alignment:TTCTGGTGGCTTGCCA-
---TGGCACCATGCCAA
 A G C T A G C T A G T C A C G T A C T G A C T G C G A T A C T G C T A G A G T C A G C T C G A T A C T G A G T C A G T C C G T A A C G T
A C G T A C G T A C G T A C G T A C T G A C T G A G T C G C T A T A G C A T G C C T G A G C A T A C T G A G T C A G T C C G T A C G T A

NF1-halfsite(CTF)/LNCaP-NF1-ChIP-Seq(Unpublished)/Homer

Match Rank:4
Score:0.56
Offset:9
Orientation:reverse strand
Alignment:TTCTGGTGGCTTGCCA-
---------CTTGGCAA
 A G C T A G C T A G T C A C G T A C T G A C T G C G A T A C T G C T A G A G T C A G C T C G A T A C T G A G T C A G T C C G T A A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A T G C A G C T A C G T A C T G A T C G A G T C C G T A T C G A

CREB3L1/MA0839.1/Jaspar

Match Rank:5
Score:0.54
Offset:3
Orientation:reverse strand
Alignment:TTCTGGTGGCTTGCCA-
---TGATGACGTGGCAN
 A G C T A G C T A G T C A C G T A C T G A C T G C G A T A C T G C T A G A G T C A G C T C G A T A C T G A G T C A G T C C G T A A C G T
A C G T A C G T A C G T G A C T C T A G T C G A G A C T A C T G G C T A A G T C A T C G A G C T C T A G C A T G G A T C C T G A A G C T

RBPJ:Ebox(?,bHLH)/Panc1-Rbpj1-ChIP-Seq(GSE47459)/Homer

Match Rank:6
Score:0.54
Offset:-1
Orientation:reverse strand
Alignment:-TTCTGGTGGCTTGCCA
CAKCTGKYCYYTTYCCC
 A C G T A G C T A G C T A G T C A C G T A C T G A C T G C G A T A C T G C T A G A G T C A G C T C G A T A C T G A G T C A G T C C G T A
T G A C G C T A A C G T T G A C C G A T A C T G A C T G A G T C A G T C A G T C A G C T A G C T A G C T A G C T G A T C T G A C G T A C

NFIX/MA0671.1/Jaspar

Match Rank:7
Score:0.53
Offset:9
Orientation:forward strand
Alignment:TTCTGGTGGCTTGCCA--
---------CGTGCCAAG
 A G C T A G C T A G T C A C G T A C T G A C T G C G A T A C T G C T A G A G T C A G C T C G A T A C T G A G T C A G T C C G T A A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T T A G C C A T G G C A T A C T G A T G C A G T C T G C A C T G A T A C G

NFIC/MA0161.1/Jaspar

Match Rank:8
Score:0.52
Offset:11
Orientation:reverse strand
Alignment:TTCTGGTGGCTTGCCA-
-----------TGCCAA
 A G C T A G C T A G T C A C G T A C T G A C T G C G A T A C T G C T A G A G T C A G C T C G A T A C T G A G T C A G T C C G T A A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T G C A T C A T G G A T C A G T C G T C A C T G A

NFIA/MA0670.1/Jaspar

Match Rank:9
Score:0.52
Offset:9
Orientation:forward strand
Alignment:TTCTGGTGGCTTGCCA---
---------GGTGCCAAGT
 A G C T A G C T A G T C A C G T A C T G A C T G C G A T A C T G C T A G A G T C A G C T C G A T A C T G A G T C A G T C C G T A A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T T C A G C A T G A C G T A C T G A G T C A G T C C G T A C G T A T C A G C G A T

MF0003.1_REL_class/Jaspar

Match Rank:10
Score:0.52
Offset:5
Orientation:forward strand
Alignment:TTCTGGTGGCTTGCCA
-----GGGGATTTCC-
 A G C T A G C T A G T C A C G T A C T G A C T G C G A T A C T G C T A G A G T C A G C T C G A T A C T G A G T C A G T C C G T A
A C G T A C G T A C G T A C G T A C G T A T C G A C T G C A T G C T A G G C T A C G A T A G C T G A C T G A T C G T A C A C G T