Information for 2-TGTCCTTGAKCTACAD (Motif 3)

A C G T A C T G A G C T G T A C A G T C A G C T A C G T A T C G G T C A C A T G A G T C C G A T C T G A A G T C G T C A C G A T
Reverse Opposite:
G C T A A C G T A C T G G A C T C G T A A C T G G T A C A C G T T A G C C G T A C T G A C T A G A C T G C T G A G T A C G T C A
p-value:1e-14
log p-value:-3.245e+01
Information Content per bp:1.735
Number of Target Sequences with motif10.0
Percentage of Target Sequences with motif1.39%
Number of Background Sequences with motif12.9
Percentage of Background Sequences with motif0.03%
Average Position of motif in Targets42.1 +/- 27.6bp
Average Position of motif in Background53.0 +/- 27.0bp
Strand Bias (log2 ratio + to - strand density)-1.2
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

RAR:RXR(NR),DR5/ES-RAR-ChIP-Seq(GSE56893)/Homer

Match Rank:1
Score:0.75
Offset:0
Orientation:reverse strand
Alignment:TGTCCTTGAKCTACAD
TGACCTTGACCT----
 A C G T A C T G A G C T G T A C A G T C A G C T A C G T A T C G G T C A C A T G A G T C C G A T C T G A A G T C G T C A C G A T
G A C T T A C G G C T A T G A C A G T C A G C T A C G T C T A G T C G A G T A C G T A C A G C T A C G T A C G T A C G T A C G T

RARg(NR)/ES-RARg-ChIP-Seq(GSE30538)/Homer

Match Rank:2
Score:0.74
Offset:0
Orientation:reverse strand
Alignment:TGTCCTTGAKCTACAD
TGACCTTGACCT----
 A C G T A C T G A G C T G T A C A G T C A G C T A C G T A T C G G T C A C A T G A G T C C G A T C T G A A G T C G T C A C G A T
G A C T T C A G T G C A A G T C A G T C G A C T A C G T T A C G C G T A G T A C G A T C G A C T A C G T A C G T A C G T A C G T

Nr5a2/MA0505.1/Jaspar

Match Rank:3
Score:0.72
Offset:-2
Orientation:reverse strand
Alignment:--TGTCCTTGAKCTACAD
GCTGACCTTGAACTN---
 A C G T A C G T A C G T A C T G A G C T G T A C A G T C A G C T A C G T A T C G G T C A C A T G A G T C C G A T C T G A A G T C G T C A C G A T
T A C G T G A C G C A T T C A G C T G A A G T C A G T C A G C T C A G T A T C G C T G A T C G A G A T C G A C T A G C T A C G T A C G T A C G T

SF1(NR)/H295R-Nr5a1-ChIP-Seq(GSE44220)/Homer

Match Rank:4
Score:0.67
Offset:-2
Orientation:reverse strand
Alignment:--TGTCCTTGAKCTACAD
BNTGDCCTTG--------
 A C G T A C G T A C G T A C T G A G C T G T A C A G T C A G C T A C G T A T C G G T C A C A T G A G T C C G A T C T G A A G T C G T C A C G A T
A T G C C A T G A C G T C T A G C T G A T G A C T G A C G A C T G C A T A C T G A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

Nr5a2(NR)/Pancreas-LRH1-ChIP-Seq(GSE34295)/Homer

Match Rank:5
Score:0.66
Offset:0
Orientation:reverse strand
Alignment:TGTCCTTGAKCTACAD
TGACCTTGAV------
 A C G T A C T G A G C T G T A C A G T C A G C T A C G T A T C G G T C A C A T G A G T C C G A T C T G A A G T C G T C A C G A T
G C A T C T A G C T G A G A T C G T A C G A C T G A C T A T C G C T G A T G C A A C G T A C G T A C G T A C G T A C G T A C G T

Nr5a2(NR)/mES-Nr5a2-ChIP-Seq(GSE19019)/Homer

Match Rank:6
Score:0.66
Offset:0
Orientation:reverse strand
Alignment:TGTCCTTGAKCTACAD
TGACCTTGAN------
 A C G T A C T G A G C T G T A C A G T C A G C T A C G T A T C G G T C A C A T G A G T C C G A T C T G A A G T C G T C A C G A T
G C A T C T A G C T G A T G A C G A T C A G C T C A G T A T C G C T G A T G C A A C G T A C G T A C G T A C G T A C G T A C G T

Esrrg/MA0643.1/Jaspar

Match Rank:7
Score:0.65
Offset:-1
Orientation:reverse strand
Alignment:-TGTCCTTGAKCTACAD
ATGACCTTGA-------
 A C G T A C G T A C T G A G C T G T A C A G T C A G C T A C G T A T C G G T C A C A T G A G T C C G A T C T G A A G T C G T C A C G A T
C G T A G A C T T C A G G T C A T A G C G T A C A G C T G A C T A T C G C T G A A C G T A C G T A C G T A C G T A C G T A C G T A C G T

ESRRB/MA0141.3/Jaspar

Match Rank:8
Score:0.65
Offset:-2
Orientation:reverse strand
Alignment:--TGTCCTTGAKCTACAD
NATGACCTTGA-------
 A C G T A C G T A C G T A C T G A G C T G T A C A G T C A G C T A C G T A T C G G T C A C A T G A G T C C G A T C T G A A G T C G T C A C G A T
C G A T C G T A G A C T C T A G T C G A T A G C A G T C A G C T C G A T A T C G C T G A A C G T A C G T A C G T A C G T A C G T A C G T A C G T

Esrrb(NR)/mES-Esrrb-ChIP-Seq(GSE11431)/Homer

Match Rank:9
Score:0.64
Offset:-1
Orientation:forward strand
Alignment:-TGTCCTTGAKCTACAD
NTGACCTTGA-------
 A C G T A C G T A C T G A G C T G T A C A G T C A G C T A C G T A T C G G T C A C A T G A G T C C G A T C T G A A G T C G T C A C G A T
C A T G A G C T T A C G G T C A G T A C T A G C A G C T G A C T A T C G T C G A A C G T A C G T A C G T A C G T A C G T A C G T A C G T

Esrra/MA0592.2/Jaspar

Match Rank:10
Score:0.61
Offset:-1
Orientation:reverse strand
Alignment:-TGTCCTTGAKCTACAD
ATGACCTTGAA------
 A C G T A C G T A C T G A G C T G T A C A G T C A G C T A C G T A T C G G T C A C A T G A G T C C G A T C T G A A G T C G T C A C G A T
C G T A A G C T T A C G T G C A T G A C T G A C A G C T A G C T A T C G C T G A T G C A A C G T A C G T A C G T A C G T A C G T A C G T