Information for 1-GAGKGAAAACAAA (Motif 2)

A T C G C G T A T A C G A C G T A C T G G T C A C T G A C G T A T C G A A T G C C G T A T C G A G T C A
Reverse Opposite:
A C G T A G C T C G A T A T C G A C G T G C A T A G C T C A G T T G A C T G C A A T G C G A C T A T G C
p-value:1e-14
log p-value:-3.371e+01
Information Content per bp:1.669
Number of Target Sequences with motif21.0
Percentage of Target Sequences with motif2.92%
Number of Background Sequences with motif128.2
Percentage of Background Sequences with motif0.27%
Average Position of motif in Targets50.5 +/- 22.4bp
Average Position of motif in Background47.6 +/- 28.0bp
Strand Bias (log2 ratio + to - strand density)-1.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

FOXP1/MA0481.1/Jaspar

Match Rank:1
Score:0.70
Offset:-1
Orientation:forward strand
Alignment:-GAGKGAAAACAAA-
CAAAAGTAAACAAAG
 A C G T A T C G C G T A T A C G A C G T A C T G G T C A C T G A C G T A T C G A A T G C C G T A T C G A G T C A A C G T
G T A C G C T A C G T A T C G A C T G A T C A G G C A T C G T A C G T A C G T A T G A C C G T A T G C A C G T A T C A G

Fox:Ebox(Forkhead,bHLH)/Panc1-Foxa2-ChIP-Seq(GSE47459)/Homer

Match Rank:2
Score:0.70
Offset:-4
Orientation:forward strand
Alignment:----GAGKGAAAACAAA
NNNVCTGWGYAAACASN
 A C G T A C G T A C G T A C G T A T C G C G T A T A C G A C G T A C T G G T C A C T G A C G T A T C G A A T G C C G T A T C G A G T C A
A T G C C T G A A T C G T A C G A G T C C G A T T C A G C G A T C T A G A G C T G T C A G T C A C G T A A G T C C G T A T A C G C T G A

PB0016.1_Foxj1_1/Jaspar

Match Rank:3
Score:0.69
Offset:1
Orientation:forward strand
Alignment:GAGKGAAAACAAA----
-AAAGTAAACAAAAATT
 A T C G C G T A T A C G A C G T A C T G G T C A C T G A C G T A T C G A A T G C C G T A T C G A G T C A A C G T A C G T A C G T A C G T
A C G T G C T A C G A T G C T A C T A G G A C T G T C A G C T A C G T A G A T C C G T A G T C A C G T A G T C A C G T A C A G T C A G T

FOXP2/MA0593.1/Jaspar

Match Rank:4
Score:0.66
Offset:2
Orientation:forward strand
Alignment:GAGKGAAAACAAA
--AAGTAAACAAA
 A T C G C G T A T A C G A C G T A C T G G T C A C T G A C G T A T C G A A T G C C G T A T C G A G T C A
A C G T A C G T C T G A C G T A C T A G C G A T C G T A C G T A C G T A A G T C C G T A T C G A C T G A

Foxk1/MA0852.1/Jaspar

Match Rank:5
Score:0.65
Offset:-1
Orientation:forward strand
Alignment:-GAGKGAAAACAAA---
AAAATGTAAACAAACAG
 A C G T A T C G C G T A T A C G A C G T A C T G G T C A C T G A C G T A T C G A A T G C C G T A T C G A G T C A A C G T A C G T A C G T
C G T A C T G A C G T A C G T A A C G T T C A G C G A T G T C A G C T A C G T A A G T C C G T A G C T A C G T A T A G C T C G A A T C G

PB0018.1_Foxk1_1/Jaspar

Match Rank:6
Score:0.65
Offset:-1
Orientation:forward strand
Alignment:-GAGKGAAAACAAA---
AAAATGTAAACAAACAG
 A C G T A T C G C G T A T A C G A C G T A C T G G T C A C T G A C G T A T C G A A T G C C G T A T C G A G T C A A C G T A C G T A C G T
C G T A C T G A C G T A C G T A A C G T T C A G C G A T G T C A G C T A C G T A A G T C C G T A G C T A C G T A T A G C T C G A A T C G

Foxj3/MA0851.1/Jaspar

Match Rank:7
Score:0.65
Offset:-1
Orientation:forward strand
Alignment:-GAGKGAAAACAAA---
AAAAAGTAAACAAACAC
 A C G T A T C G C G T A T A C G A C G T A C T G G T C A C T G A C G T A T C G A A T G C C G T A T C G A G T C A A C G T A C G T A C G T
G C T A C T G A G T C A C G T A C T G A T C A G G A C T G T C A G C T A C G T A A G T C C G T A G C T A G C T A T A G C T G A C G T A C

PB0017.1_Foxj3_1/Jaspar

Match Rank:8
Score:0.65
Offset:-1
Orientation:forward strand
Alignment:-GAGKGAAAACAAA---
AAAAAGTAAACAAACAC
 A C G T A T C G C G T A T A C G A C G T A C T G G T C A C T G A C G T A T C G A A T G C C G T A T C G A G T C A A C G T A C G T A C G T
G C T A C T G A G T C A C G T A C T G A T C A G G A C T G T C A G C T A C G T A A G T C C G T A G C T A G C T A T A G C T G A C G T A C

Sox3/MA0514.1/Jaspar

Match Rank:9
Score:0.64
Offset:5
Orientation:reverse strand
Alignment:GAGKGAAAACAAA--
-----AAAACAAAGG
 A T C G C G T A T A C G A C G T A C T G G T C A C T G A C G T A T C G A A T G C C G T A T C G A G T C A A C G T A C G T
A C G T A C G T A C G T A C G T A C G T T C G A T C G A T C G A C G T A A T G C C G T A C G T A C G T A C T A G T A C G

Foxo1/MA0480.1/Jaspar

Match Rank:10
Score:0.63
Offset:3
Orientation:reverse strand
Alignment:GAGKGAAAACAAA-
---TGTAAACAGGA
 A T C G C G T A T A C G A C G T A C T G G T C A C T G A C G T A T C G A A T G C C G T A T C G A G T C A A C G T
A C G T A C G T A C G T C G A T C T A G C G A T G T C A C G T A C G T A A G T C C G T A T C A G T A C G G T C A