Information for 9-CCCTCCGGACAGA (Motif 19)

A T G C A G T C A G T C C G A T A G T C A T G C T C A G T A C G G C T A G T A C C G T A T C A G C T G A
Reverse Opposite:
A G C T A G T C C G A T A C T G C G A T A T G C A G T C T A C G T C A G C G T A A C T G C T A G A T C G
p-value:1e-10
log p-value:-2.484e+01
Information Content per bp:1.706
Number of Target Sequences with motif14.0
Percentage of Target Sequences with motif1.94%
Number of Background Sequences with motif74.7
Percentage of Background Sequences with motif0.16%
Average Position of motif in Targets50.3 +/- 28.3bp
Average Position of motif in Background51.4 +/- 22.2bp
Strand Bias (log2 ratio + to - strand density)0.2
Multiplicity (# of sites on avg that occur together)1.07
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

EBF(EBF)/proBcell-EBF-ChIP-Seq(GSE21978)/Homer

Match Rank:1
Score:0.59
Offset:-1
Orientation:reverse strand
Alignment:-CCCTCCGGACAGA
TCCCNNGGGACN--
 A C G T A T G C A G T C A G T C C G A T A G T C A T G C T C A G T A C G G C T A G T A C C G T A T C A G C T G A
G A C T A G T C A G T C A G T C G A C T C T G A A C T G C T A G A C T G C T G A T A G C G A T C A C G T A C G T

TFAP2C(var.3)/MA0815.1/Jaspar

Match Rank:2
Score:0.56
Offset:-2
Orientation:forward strand
Alignment:--CCCTCCGGACAGA
TGCCCTGAGGGCA--
 A C G T A C G T A T G C A G T C A G T C C G A T A G T C A T G C T C A G T A C G G C T A G T A C C G T A T C A G C T G A
G C A T A T C G A G T C A G T C A G T C A G C T A T C G T C G A T C A G A C T G A C T G A T G C C G T A A C G T A C G T

TFAP2B(var.3)/MA0813.1/Jaspar

Match Rank:3
Score:0.56
Offset:-2
Orientation:forward strand
Alignment:--CCCTCCGGACAGA
TGCCCTGAGGGCA--
 A C G T A C G T A T G C A G T C A G T C C G A T A G T C A T G C T C A G T A C G G C T A G T A C C G T A T C A G C T G A
G C A T A T C G A G T C A G T C A G T C A G C T A C T G T C G A T C A G A C T G A C T G A T G C C G T A A C G T A C G T

AP-2alpha(AP2)/Hela-AP2alpha-ChIP-Seq(GSE31477)/Homer

Match Rank:4
Score:0.56
Offset:0
Orientation:reverse strand
Alignment:CCCTCCGGACAGA
GCCTCAGGGCAT-
 A T G C A G T C A G T C C G A T A G T C A T G C T C A G T A C G G C T A G T A C C G T A T C A G C T G A
A T C G A G T C A G T C A G C T A T G C C T G A C T A G A C T G A T C G G T A C G C T A C G A T A C G T

TFAP2A(var.3)/MA0872.1/Jaspar

Match Rank:5
Score:0.55
Offset:-2
Orientation:reverse strand
Alignment:--CCCTCCGGACAGA
TGCCCNNAGGGCA--
 A C G T A C G T A T G C A G T C A G T C C G A T A G T C A T G C T C A G T A C G G C T A G T A C C G T A T C A G C T G A
G C A T A T C G A G T C A G T C A G T C A G C T T A G C T C G A T C A G A C T G A C T G A T G C C G T A A C G T A C G T

AP-2gamma(AP2)/MCF7-TFAP2C-ChIP-Seq(GSE21234)/Homer

Match Rank:6
Score:0.55
Offset:0
Orientation:forward strand
Alignment:CCCTCCGGACAGA
SCCTSAGGSCAW-
 A T G C A G T C A G T C C G A T A G T C A T G C T C A G T A C G G C T A G T A C C G T A T C A G C T G A
A T C G A G T C A G T C G A C T A T G C C T G A C T A G A C T G T A C G G T A C C T G A C G A T A C G T

EBF1/MA0154.3/Jaspar

Match Rank:7
Score:0.55
Offset:-3
Orientation:forward strand
Alignment:---CCCTCCGGACAGA
ATTCCCAAGGGAAT--
 A C G T A C G T A C G T A T G C A G T C A G T C C G A T A G T C A T G C T C A G T A C G G C T A G T A C C G T A T C A G C T G A
C T G A A C G T G A C T A T G C A G T C A G T C G C T A C G T A T C A G T C A G C A T G C T G A G T C A G A C T A C G T A C G T

EBF1(EBF)/Near-E2A-ChIP-Seq(GSE21512)/Homer

Match Rank:8
Score:0.54
Offset:-2
Orientation:reverse strand
Alignment:--CCCTCCGGACAGA
TCCCCTGGGGAC---
 A C G T A C G T A T G C A G T C A G T C C G A T A G T C A T G C T C A G T A C G G C T A G T A C C G T A T C A G C T G A
A G C T A G T C A G T C G A T C G A T C C G A T C T A G C T A G C T A G T C A G T G C A G T A C A C G T A C G T A C G T

PB0189.1_Tcfap2a_2/Jaspar

Match Rank:9
Score:0.52
Offset:-2
Orientation:forward strand
Alignment:--CCCTCCGGACAGA
TCACCTCTGGGCAG-
 A C G T A C G T A T G C A G T C A G T C C G A T A G T C A T G C T C A G T A C G G C T A G T A C C G T A T C A G C T G A
G A C T G T A C C T G A A G T C G A T C A G C T A T G C G C A T C T A G C T A G C A T G A G T C C G T A A C T G A C G T

SA0002.1_at_AC_acceptor/Jaspar

Match Rank:10
Score:0.51
Offset:-1
Orientation:reverse strand
Alignment:-CCCTCCGGACAGA------
NNCCTGNAAAAAAAAAAAAA
 A C G T A T G C A G T C A G T C C G A T A G T C A T G C T C A G T A C G G C T A G T A C C G T A T C A G C T G A A C G T A C G T A C G T A C G T A C G T A C G T
G C T A C G T A A G T C A G T C A C G T C T A G C T G A C T G A C T G A C T G A C T G A T C G A T C G A T C G A T C G A C T G A C T G A C T G A T C G A C T G A