Information for 2-GGAGTACTTG (Motif 18)

C T A G C A T G C G T A C T A G A G C T T G C A A T G C C G A T C G A T T C A G
Reverse Opposite:
A G T C G C T A G C T A T A C G A C G T T C G A G A T C G C A T G T A C G A T C
p-value:1e-11
log p-value:-2.542e+01
Information Content per bp:1.654
Number of Target Sequences with motif65.0
Percentage of Target Sequences with motif9.03%
Number of Background Sequences with motif1678.7
Percentage of Background Sequences with motif3.51%
Average Position of motif in Targets54.9 +/- 26.2bp
Average Position of motif in Background50.1 +/- 31.7bp
Strand Bias (log2 ratio + to - strand density)0.5
Multiplicity (# of sites on avg that occur together)1.05
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0152.1_Nkx3-1_2/Jaspar

Match Rank:1
Score:0.75
Offset:-4
Orientation:forward strand
Alignment:----GGAGTACTTG---
ACTCCAAGTACTTGGAA
 A C G T A C G T A C G T A C G T C T A G C A T G C G T A C T A G A G C T T G C A A T G C C G A T C G A T T C A G A C G T A C G T A C G T
T C G A G T A C C G A T A T G C T A G C C T G A C T G A C A T G A G C T T C G A G T A C G A C T G A C T A C T G T C A G T G C A G T C A

PH0116.1_Nkx2-9/Jaspar

Match Rank:2
Score:0.68
Offset:-3
Orientation:forward strand
Alignment:---GGAGTACTTG----
TTTTAAGTACTTAAATT
 A C G T A C G T A C G T C T A G C A T G C G T A C T A G A G C T T G C A A T G C C G A T C G A T T C A G A C G T A C G T A C G T A C G T
C G A T G A C T G C A T C G A T C T G A C T G A A T C G A G C T C T G A A T G C G A C T G A C T T C G A C G T A G C T A C G A T G A C T

PH0117.1_Nkx3-1/Jaspar

Match Rank:3
Score:0.66
Offset:-3
Orientation:forward strand
Alignment:---GGAGTACTTG----
TACTAAGTACTTAAATG
 A C G T A C G T A C G T C T A G C A T G C G T A C T A G A G C T T G C A A T G C C G A T C G A T T C A G A C G T A C G T A C G T A C G T
C G A T C G A T G A T C C G A T C T G A C T G A A T C G A G C T T C G A A T G C G A C T G A C T G C T A C T G A C G T A C G A T A T C G

Znf263(Zf)/K562-Znf263-ChIP-Seq(GSE31477)/Homer

Match Rank:4
Score:0.64
Offset:-1
Orientation:reverse strand
Alignment:-GGAGTACTTG
GGGAGGACNG-
 A C G T C T A G C A T G C G T A C T A G A G C T T G C A A T G C C G A T C G A T T C A G
C T A G A C T G A C T G C G T A A C T G A T C G C G T A A T G C A G C T T A C G A C G T

Nkx3.1(Homeobox)/LNCaP-Nkx3.1-ChIP-Seq(GSE28264)/Homer

Match Rank:5
Score:0.64
Offset:-1
Orientation:reverse strand
Alignment:-GGAGTACTTG
TTAAGTGCTT-
 A C G T C T A G C A T G C G T A C T A G A G C T T G C A A T G C C G A T C G A T T C A G
A C G T C A G T T C G A C G T A A C T G A C G T C T A G A T G C A G C T A G C T A C G T

PH0112.1_Nkx2-3/Jaspar

Match Rank:6
Score:0.64
Offset:-3
Orientation:reverse strand
Alignment:---GGAGTACTTG---
CNTTAAGTACTTAANG
 A C G T A C G T A C G T C T A G C A T G C G T A C T A G A G C T T G C A A T G C C G A T C G A T T C A G A C G T A C G T A C G T
G A T C C G T A G A C T A G C T C T G A C T G A A T C G A G C T C T G A A T G C G A C T G A C T C G T A T C G A T C G A C T A G

PH0129.1_Otx1/Jaspar

Match Rank:7
Score:0.63
Offset:-5
Orientation:forward strand
Alignment:-----GGAGTACTTG--
AGAGGGGATTAATTTAT
 A C G T A C G T A C G T A C G T A C G T C T A G C A T G C G T A C T A G A G C T T G C A A T G C C G A T C G A T T C A G A C G T A C G T
C T A G C A T G C G T A C T A G T A C G C T A G C A T G G T C A A C G T C G A T C G T A C G T A G A C T G C A T G A C T G C T A A G C T

PH0125.1_Obox5_2/Jaspar

Match Rank:8
Score:0.62
Offset:-5
Orientation:reverse strand
Alignment:-----GGAGTACTTG--
NANAGGGATTAATTATN
 A C G T A C G T A C G T A C G T A C G T C T A G C A T G C G T A C T A G A G C T T G C A A T G C C G A T C G A T T C A G A C G T A C G T
T C G A C T G A T C A G T C G A T C A G T C A G A C T G G C T A A C G T C G A T C G T A C G T A G C A T G A C T T C G A G C A T T G A C

PH0130.1_Otx2/Jaspar

Match Rank:9
Score:0.61
Offset:-5
Orientation:forward strand
Alignment:-----GGAGTACTTG--
TGTAGGGATTAATTGTC
 A C G T A C G T A C G T A C G T A C G T C T A G C A T G C G T A C T A G A G C T T G C A A T G C C G A T C G A T T C A G A C G T A C G T
C A G T C T A G C G A T T C G A T C A G T C A G C A T G G T C A C G A T C G A T C G T A C T G A A G C T G A C T C T A G C A G T G A T C

PH0138.1_Pitx2/Jaspar

Match Rank:10
Score:0.61
Offset:-5
Orientation:forward strand
Alignment:-----GGAGTACTTG--
TGAAGGGATTAATCATC
 A C G T A C G T A C G T A C G T A C G T C T A G C A T G C G T A C T A G A G C T T G C A A T G C C G A T C G A T T C A G A C G T A C G T
C A G T C A T G C G T A T C G A T C A G C T A G C A T G G T C A A G C T G A C T C G T A C T G A A G C T G A T C C T G A C G A T G A T C