Information for 5-RARACYATYTCAC (Motif 10)

C T G A C G T A C T A G G T C A A G T C G A T C C G T A A C G T A G T C A C G T A G T C C G T A G T A C
Reverse Opposite:
A C T G A C G T A C T G C G T A C T A G C G T A A C G T C T A G A C T G A C G T A G T C A C G T A G C T
p-value:1e-12
log p-value:-2.765e+01
Information Content per bp:1.871
Number of Target Sequences with motif6.0
Percentage of Target Sequences with motif0.83%
Number of Background Sequences with motif2.7
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets57.0 +/- 26.8bp
Average Position of motif in Background53.4 +/- 13.1bp
Strand Bias (log2 ratio + to - strand density)2.3
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PH0044.1_Homez/Jaspar

Match Rank:1
Score:0.53
Offset:-4
Orientation:reverse strand
Alignment:----RARACYATYTCAC
NNTAAAAACGATGTTNT
 A C G T A C G T A C G T A C G T C T G A C G T A C T A G G T C A A G T C G A T C C G T A A C G T A G T C A C G T A G T C C G T A G T A C
G A T C G A C T C G A T T C G A C G T A C G T A G C T A G C T A A G T C C A T G C G T A C G A T A C T G C G A T C G A T C G A T G C A T

Tbet(T-box)/CD8-Tbet-ChIP-Seq(GSE33802)/Homer

Match Rank:2
Score:0.53
Offset:5
Orientation:reverse strand
Alignment:RARACYATYTCAC--
-----KTTCACACCT
 C T G A C G T A C T A G G T C A A G T C G A T C C G T A A C G T A G T C A C G T A G T C C G T A G T A C A C G T A C G T
A C G T A C G T A C G T A C G T A C G T C A G T C A G T A C G T T A G C G C T A A G T C C T G A G T A C G A T C G C A T

Sox11/MA0869.1/Jaspar

Match Rank:3
Score:0.53
Offset:2
Orientation:forward strand
Alignment:RARACYATYTCAC----
--AACAATTTCAGTGTT
 C T G A C G T A C T A G G T C A A G T C G A T C C G T A A C G T A G T C A C G T A G T C C G T A G T A C A C G T A C G T A C G T A C G T
A C G T A C G T C G T A C G T A A G T C C G T A C G T A A C G T A G C T C A G T A G T C C G T A A C T G A C G T A C T G A C G T A G C T

PB0175.1_Sox4_2/Jaspar

Match Rank:4
Score:0.53
Offset:-3
Orientation:reverse strand
Alignment:---RARACYATYTCAC-
TNCNNAACAATTTTTNC
 A C G T A C G T A C G T C T G A C G T A C T A G G T C A A G T C G A T C C G T A A C G T A G T C A C G T A G T C C G T A G T A C A C G T
G A C T G A C T G A T C A T G C G A C T C T G A C G T A A G T C C G T A C T G A G A C T G A C T G A C T G A C T C G A T A G T C A T G C

PB0165.1_Sox11_2/Jaspar

Match Rank:5
Score:0.53
Offset:-3
Orientation:reverse strand
Alignment:---RARACYATYTCAC
NNCNNAACAATTNT--
 A C G T A C G T A C G T C T G A C G T A C T A G G T C A A G T C G A T C C G T A A C G T A G T C A C G T A G T C C G T A G T A C
G C A T G A C T A G T C G T C A C G A T C T G A C G T A A G T C C G T A T C G A A G C T G A C T G A C T G C A T A C G T A C G T

Sox5/MA0087.1/Jaspar

Match Rank:6
Score:0.52
Offset:1
Orientation:reverse strand
Alignment:RARACYATYTCAC
-NAACAAT-----
 C T G A C G T A C T A G G T C A A G T C G A T C C G T A A C G T A G T C A C G T A G T C C G T A G T A C
A C G T G C A T C G T A C T G A A G T C C G T A G T C A A C G T A C G T A C G T A C G T A C G T A C G T

Barx1(Homeobox)/Stomach-Barx1.3xFlag-ChIP-Seq(GSE69483)/Homer

Match Rank:7
Score:0.51
Offset:1
Orientation:forward strand
Alignment:RARACYATYTCAC
-AAACMATTAN--
 C T G A C G T A C T A G G T C A A G T C G A T C C G T A A C G T A G T C A C G T A G T C C G T A G T A C
A C G T T C G A C T G A C T G A A T G C G T A C G T C A A G C T A G C T C G T A T C A G A C G T A C G T

DMRT1(DM)/Testis-DMRT1-ChIP-Seq(GSE64892)/Homer

Match Rank:8
Score:0.51
Offset:0
Orientation:reverse strand
Alignment:RARACYATYTCAC--
GHWACAWTGTWDCWA
 C T G A C G T A C T A G G T C A A G T C G A T C C G T A A C G T A G T C A C G T A G T C C G T A G T A C A C G T A C G T
C T A G G C T A G C A T G C T A G A T C G C T A G C T A C G A T C T A G G C A T C G T A C G A T G A T C G C T A C G T A

SRY/MA0084.1/Jaspar

Match Rank:9
Score:0.51
Offset:-1
Orientation:forward strand
Alignment:-RARACYATYTCAC
GTAAACAAT-----
 A C G T C T G A C G T A C T A G G T C A A G T C G A T C C G T A A C G T A G T C A C G T A G T C C G T A G T A C
A C T G C G A T C G T A C G T A C G T A A G T C C G T A C T G A C G A T A C G T A C G T A C G T A C G T A C G T

DMRT6(DM)/Testis-DMRT6-ChIP-Seq(GSE60440)/Homer

Match Rank:10
Score:0.51
Offset:0
Orientation:reverse strand
Alignment:RARACYATYTCAC--
GHTACAWTGTADCHR
 C T G A C G T A C T A G G T C A A G T C G A T C C G T A A C G T A G T C A C G T A G T C C G T A G T A C A C G T A C G T
C T A G G T C A G C A T C G T A A T G C G C T A C G T A C G A T T C A G G C A T C G T A C G A T G T A C G C T A C T G A