Rank | Motif | Name | P-value | log P-pvalue | q-value (Benjamini) | # Target Sequences with Motif | % of Targets Sequences with Motif | # Background Sequences with Motif | % of Background Sequences with Motif | Motif File |
SVG |
1 |
| FOXM1(Forkhead)/MCF7-FOXM1-ChIP-Seq(GSE72977)/Homer | 1e-57 | -1.333e+02 | 0.0000 | 191.0 | 27.80% | 3411.6 | 7.36% | motif file (matrix) |
svg |
2 |
| FOXA1(Forkhead)/LNCAP-FOXA1-ChIP-Seq(GSE27824)/Homer | 1e-52 | -1.209e+02 | 0.0000 | 207.0 | 30.13% | 4317.2 | 9.32% | motif file (matrix) |
svg |
3 |
| FOXA1(Forkhead)/MCF7-FOXA1-ChIP-Seq(GSE26831)/Homer | 1e-52 | -1.205e+02 | 0.0000 | 183.0 | 26.64% | 3420.7 | 7.38% | motif file (matrix) |
svg |
4 |
| FOXA1:AR(Forkhead,NR)/LNCAP-AR-ChIP-Seq(GSE27824)/Homer | 1e-47 | -1.097e+02 | 0.0000 | 52.0 | 7.57% | 180.2 | 0.39% | motif file (matrix) |
svg |
5 |
| Fox:Ebox(Forkhead,bHLH)/Panc1-Foxa2-ChIP-Seq(GSE47459)/Homer | 1e-39 | -9.162e+01 | 0.0000 | 151.0 | 21.98% | 2968.2 | 6.41% | motif file (matrix) |
svg |
6 |
| Foxa2(Forkhead)/Liver-Foxa2-ChIP-Seq(GSE25694)/Homer | 1e-35 | -8.281e+01 | 0.0000 | 137.0 | 19.94% | 2684.6 | 5.80% | motif file (matrix) |
svg |
7 |
| GRE(NR),IR3/RAW264.7-GRE-ChIP-Seq(Unpublished)/Homer | 1e-32 | -7.403e+01 | 0.0000 | 54.0 | 7.86% | 414.9 | 0.90% | motif file (matrix) |
svg |
8 |
| Foxa3(Forkhead)/Liver-Foxa3-ChIP-Seq(GSE77670)/Homer | 1e-32 | -7.369e+01 | 0.0000 | 80.0 | 11.64% | 1032.4 | 2.23% | motif file (matrix) |
svg |
9 |
| ARE(NR)/LNCAP-AR-ChIP-Seq(GSE27824)/Homer | 1e-31 | -7.349e+01 | 0.0000 | 51.0 | 7.42% | 362.4 | 0.78% | motif file (matrix) |
svg |
10 |
| GRE(NR),IR3/A549-GR-ChIP-Seq(GSE32465)/Homer | 1e-31 | -7.166e+01 | 0.0000 | 40.0 | 5.82% | 195.3 | 0.42% | motif file (matrix) |
svg |
11 |
| PGR(NR)/EndoStromal-PGR-ChIP-Seq(GSE69539)/Homer | 1e-22 | -5.249e+01 | 0.0000 | 52.0 | 7.57% | 604.2 | 1.30% | motif file (matrix) |
svg |
12 |
| PR(NR)/T47D-PR-ChIP-Seq(GSE31130)/Homer | 1e-18 | -4.150e+01 | 0.0000 | 158.0 | 23.00% | 5163.7 | 11.15% | motif file (matrix) |
svg |
13 |
| HOXB13(Homeobox)/ProstateTumor-HOXB13-ChIP-Seq(GSE56288)/Homer | 1e-16 | -3.728e+01 | 0.0000 | 112.0 | 16.30% | 3220.3 | 6.95% | motif file (matrix) |
svg |
14 |
| FOXK1(Forkhead)/HEK293-FOXK1-ChIP-Seq(GSE51673)/Homer | 1e-15 | -3.636e+01 | 0.0000 | 121.0 | 17.61% | 3674.4 | 7.93% | motif file (matrix) |
svg |
15 |
| FoxL2(Forkhead)/Ovary-FoxL2-ChIP-Seq(GSE60858)/Homer | 1e-13 | -3.191e+01 | 0.0000 | 102.0 | 14.85% | 3025.5 | 6.53% | motif file (matrix) |
svg |
16 |
| HOXD13(Homeobox)/Chicken-Hoxd13-ChIP-Seq(GSE38910)/Homer | 1e-12 | -2.990e+01 | 0.0000 | 110.0 | 16.01% | 3500.0 | 7.56% | motif file (matrix) |
svg |
17 |
| Foxo3(Forkhead)/U2OS-Foxo3-ChIP-Seq(E-MTAB-2701)/Homer | 1e-12 | -2.861e+01 | 0.0000 | 93.0 | 13.54% | 2780.0 | 6.00% | motif file (matrix) |
svg |
18 |
| FOXP1(Forkhead)/H9-FOXP1-ChIP-Seq(GSE31006)/Homer | 1e-11 | -2.663e+01 | 0.0000 | 59.0 | 8.59% | 1414.9 | 3.05% | motif file (matrix) |
svg |
19 |
| Cdx2(Homeobox)/mES-Cdx2-ChIP-Seq(GSE14586)/Homer | 1e-11 | -2.649e+01 | 0.0000 | 79.0 | 11.50% | 2257.5 | 4.87% | motif file (matrix) |
svg |
20 |
| CDX4(Homeobox)/ZebrafishEmbryos-Cdx4.Myc-ChIP-Seq(GSE48254)/Homer | 1e-10 | -2.461e+01 | 0.0000 | 89.0 | 12.95% | 2805.3 | 6.06% | motif file (matrix) |
svg |
21 |
| Foxf1(Forkhead)/Lung-Foxf1-ChIP-Seq(GSE77951)/Homer | 1e-10 | -2.440e+01 | 0.0000 | 98.0 | 14.26% | 3243.4 | 7.00% | motif file (matrix) |
svg |
22 |
| NF1:FOXA1(CTF,Forkhead)/LNCAP-FOXA1-ChIP-Seq(GSE27824)/Homer | 1e-9 | -2.092e+01 | 0.0000 | 15.0 | 2.18% | 121.6 | 0.26% | motif file (matrix) |
svg |
23 |
| Unknown(Homeobox)/Limb-p300-ChIP-Seq/Homer | 1e-8 | -2.031e+01 | 0.0000 | 62.0 | 9.02% | 1801.4 | 3.89% | motif file (matrix) |
svg |
24 |
| Gata1(Zf)/K562-GATA1-ChIP-Seq(GSE18829)/Homer | 1e-8 | -2.008e+01 | 0.0000 | 55.0 | 8.01% | 1508.9 | 3.26% | motif file (matrix) |
svg |
25 |
| Gata2(Zf)/K562-GATA2-ChIP-Seq(GSE18829)/Homer | 1e-8 | -2.002e+01 | 0.0000 | 60.0 | 8.73% | 1727.1 | 3.73% | motif file (matrix) |
svg |
26 |
| Gata6(Zf)/HUG1N-GATA6-ChIP-Seq(GSE51936)/Homer | 1e-8 | -1.870e+01 | 0.0000 | 79.0 | 11.50% | 2677.5 | 5.78% | motif file (matrix) |
svg |
27 |
| AR-halfsite(NR)/LNCaP-AR-ChIP-Seq(GSE27824)/Homer | 1e-8 | -1.849e+01 | 0.0000 | 189.0 | 27.51% | 8642.1 | 18.66% | motif file (matrix) |
svg |
28 |
| FOXK2(Forkhead)/U2OS-FOXK2-ChIP-Seq(E-MTAB-2204)/Homer | 1e-7 | -1.783e+01 | 0.0000 | 65.0 | 9.46% | 2066.6 | 4.46% | motif file (matrix) |
svg |
29 |
| Gata4(Zf)/Heart-Gata4-ChIP-Seq(GSE35151)/Homer | 1e-7 | -1.729e+01 | 0.0000 | 81.0 | 11.79% | 2867.2 | 6.19% | motif file (matrix) |
svg |
30 |
| GATA3(Zf)/iTreg-Gata3-ChIP-Seq(GSE20898)/Homer | 1e-6 | -1.612e+01 | 0.0000 | 113.0 | 16.45% | 4617.6 | 9.97% | motif file (matrix) |
svg |
31 |
| Foxo1(Forkhead)/RAW-Foxo1-ChIP-Seq(Fan_et_al.)/Homer | 1e-6 | -1.515e+01 | 0.0000 | 122.0 | 17.76% | 5199.9 | 11.23% | motif file (matrix) |
svg |
32 |
| GATA(Zf),IR3/iTreg-Gata3-ChIP-Seq(GSE20898)/Homer | 1e-5 | -1.159e+01 | 0.0001 | 18.0 | 2.62% | 354.2 | 0.76% | motif file (matrix) |
svg |
33 |
| NF1(CTF)/LNCAP-NF1-ChIP-Seq(Unpublished)/Homer | 1e-4 | -1.002e+01 | 0.0005 | 16.0 | 2.33% | 327.6 | 0.71% | motif file (matrix) |
svg |
34 |
| NF1-halfsite(CTF)/LNCaP-NF1-ChIP-Seq(Unpublished)/Homer | 1e-4 | -9.995e+00 | 0.0005 | 76.0 | 11.06% | 3206.0 | 6.92% | motif file (matrix) |
svg |
35 |
| HOXA9(Homeobox)/HSC-Hoxa9-ChIP-Seq(GSE33509)/Homer | 1e-2 | -6.867e+00 | 0.0108 | 47.0 | 6.84% | 1959.9 | 4.23% | motif file (matrix) |
svg |
36 |
| EBF1(EBF)/Near-E2A-ChIP-Seq(GSE21512)/Homer | 1e-2 | -6.615e+00 | 0.0135 | 29.0 | 4.22% | 1053.0 | 2.27% | motif file (matrix) |
svg |
37 |
| Phox2a(Homeobox)/Neuron-Phox2a-ChIP-Seq(GSE31456)/Homer | 1e-2 | -6.342e+00 | 0.0173 | 32.0 | 4.66% | 1223.6 | 2.64% | motif file (matrix) |
svg |
38 |
| SPDEF(ETS)/VCaP-SPDEF-ChIP-Seq(SRA014231)/Homer | 1e-2 | -6.050e+00 | 0.0226 | 44.0 | 6.40% | 1881.0 | 4.06% | motif file (matrix) |
svg |
39 |
| GATA(Zf),IR4/iTreg-Gata3-ChIP-Seq(GSE20898)/Homer | 1e-2 | -4.975e+00 | 0.0645 | 8.0 | 1.16% | 184.4 | 0.40% | motif file (matrix) |
svg |
40 |
| Ets1-distal(ETS)/CD4+-PolII-ChIP-Seq(Barski_et_al.)/Homer | 1e-2 | -4.643e+00 | 0.0877 | 16.0 | 2.33% | 552.8 | 1.19% | motif file (matrix) |
svg |
41 |
| ZNF189(Zf)/HEK293-ZNF189.GFP-ChIP-Seq(GSE58341)/Homer | 1e-2 | -4.618e+00 | 0.0877 | 30.0 | 4.37% | 1272.3 | 2.75% | motif file (matrix) |
svg |