Information for 4-GTACTTKGTACGTMCT (Motif 5)

A C T G A C G T C G T A A G T C A C G T A C G T A C G T A C T G G A C T C T G A G A T C C A T G A G C T G T A C A G T C A C G T
Reverse Opposite:
G T C A A C T G A C T G C T G A G T A C C A T G A G C T C G T A A G T C G T C A G T C A C G T A C T A G A C G T C G T A A G T C
p-value:1e-15
log p-value:-3.558e+01
Information Content per bp:1.762
Number of Target Sequences with motif8.0
Percentage of Target Sequences with motif1.16%
Number of Background Sequences with motif3.2
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets48.5 +/- 19.1bp
Average Position of motif in Background28.9 +/- 6.4bp
Strand Bias (log2 ratio + to - strand density)0.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0152.1_Nkx3-1_2/Jaspar

Match Rank:1
Score:0.65
Offset:-7
Orientation:forward strand
Alignment:-------GTACTTKGTACGTMCT
ACTCCAAGTACTTGGAA------
 A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C T G A C G T C G T A A G T C A C G T A C G T A C G T A C T G G A C T C T G A G A T C C A T G A G C T G T A C A G T C A C G T
T C G A G T A C C G A T A T G C T A G C C T G A C T G A C A T G A G C T T C G A G T A C G A C T G A C T A C T G T C A G T G C A G T C A A C G T A C G T A C G T A C G T A C G T A C G T

PH0117.1_Nkx3-1/Jaspar

Match Rank:2
Score:0.58
Offset:-7
Orientation:reverse strand
Alignment:-------GTACTTKGTACGTMCT
NATTTAAGTACTTANNA------
 A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C T G A C G T C G T A A G T C A C G T A C G T A C G T A C T G G A C T C T G A G A T C C A T G A G C T G T A C A G T C A C G T
T A G C G C T A C G A T G A C T C G A T C T G A C T G A A T C G A G C T T C G A A T G C G A C T G A C T G C T A C T A G G C A T G C T A A C G T A C G T A C G T A C G T A C G T A C G T

HNF4G/MA0484.1/Jaspar

Match Rank:3
Score:0.56
Offset:-1
Orientation:reverse strand
Alignment:-GTACTTKGTACGTMCT
TGGACTTTGNNCTCN--
 A C G T A C T G A C G T C G T A A G T C A C G T A C G T A C G T A C T G G A C T C T G A G A T C C A T G A G C T G T A C A G T C A C G T
C G A T C T A G T C A G G T C A G T A C G A C T A G C T A C G T T C A G T C A G G T C A G A T C G A C T A G T C G C A T A C G T A C G T

HNF4a(NR),DR1/HepG2-HNF4a-ChIP-Seq(GSE25021)/Homer

Match Rank:4
Score:0.55
Offset:-1
Orientation:reverse strand
Alignment:-GTACTTKGTACGTMCT
TGGACTTTGNNCTNTG-
 A C G T A C T G A C G T C G T A A G T C A C G T A C G T A C G T A C T G G A C T C T G A G A T C C A T G A G C T G T A C A G T C A C G T
C G A T C T A G T C A G G T C A G T A C G A C T A G C T A C G T C T A G T C G A G T A C G A T C G A C T A G T C C G A T C A T G A C G T

PH0112.1_Nkx2-3/Jaspar

Match Rank:5
Score:0.52
Offset:-6
Orientation:forward strand
Alignment:------GTACTTKGTACGTMCT
CTTTAAGTACTTAATG------
 A C G T A C G T A C G T A C G T A C G T A C G T A C T G A C G T C G T A A G T C A C G T A C G T A C G T A C T G G A C T C T G A G A T C C A T G A G C T G T A C A G T C A C G T
G A T C A G C T A G C T G C A T C T G A C T G A A T C G A G C T C T G A A T G C G A C T G A C T T C G A C T G A G A C T C T A G A C G T A C G T A C G T A C G T A C G T A C G T

Hnf4a/MA0114.3/Jaspar

Match Rank:6
Score:0.52
Offset:-3
Orientation:reverse strand
Alignment:---GTACTTKGTACGTMCT
ATTGGACTTTGACCCC---
 A C G T A C G T A C G T A C T G A C G T C G T A A G T C A C G T A C G T A C G T A C T G G A C T C T G A G A T C C A T G A G C T G T A C A G T C A C G T
C T G A A G C T G A C T T C A G T C A G T G C A T G A C A G C T G A C T A G C T T C A G G T C A G T A C G A T C A G T C A G T C A C G T A C G T A C G T

PH0116.1_Nkx2-9/Jaspar

Match Rank:7
Score:0.52
Offset:-7
Orientation:reverse strand
Alignment:-------GTACTTKGTACGTMCT
NATTTAAGTACTTNAAA------
 A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C T G A C G T C G T A A G T C A C G T A C G T A C G T A C T G G A C T C T G A G A T C C A T G A G C T G T A C A G T C A C G T
C T G A G C T A C G A T G C A T A G C T C T G A C T G A A T C G A G C T C T G A A T G C G A C T G A C T G C T A C G T A C T G A G C T A A C G T A C G T A C G T A C G T A C G T A C G T

MSX2/MA0708.1/Jaspar

Match Rank:8
Score:0.51
Offset:0
Orientation:reverse strand
Alignment:GTACTTKGTACGTMCT
NTAATTGG--------
 A C T G A C G T C G T A A G T C A C G T A C G T A C G T A C T G G A C T C T G A G A T C C A T G A G C T G T A C A G T C A C G T
A G C T C A G T T C G A C G T A A C G T C A G T C T A G A T C G A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

Nobox/MA0125.1/Jaspar

Match Rank:9
Score:0.51
Offset:1
Orientation:forward strand
Alignment:GTACTTKGTACGTMCT
-TAATTGGT-------
 A C T G A C G T C G T A A G T C A C G T A C G T A C G T A C T G G A C T C T G A G A T C C A T G A G C T G T A C A G T C A C G T
A C G T A G C T C G T A C G T A A C G T C A G T C T A G A T C G A G C T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

NFIA/MA0670.1/Jaspar

Match Rank:10
Score:0.51
Offset:2
Orientation:reverse strand
Alignment:GTACTTKGTACGTMCT
--NNTTGGCANN----
 A C T G A C G T C G T A A G T C A C G T A C G T A C G T A C T G G A C T C T G A G A T C C A T G A G C T G T A C A G T C A C G T
A C G T A C G T G C T A A G T C A C G T A C G T A C T G A C T G A G T C C G T A G T A C A G T C A C G T A C G T A C G T A C G T