Information for 25-TCCCATGCACACC (Motif 48)

A C G T A G T C A G T C A G T C C G T A A C G T A C T G A G T C C G T A A G T C G T C A A G T C G T A C
Reverse Opposite:
A C T G A C T G A C G T C T A G A C G T A C T G A G T C C G T A A C G T A C T G A C T G C T A G C G T A
p-value:1e-3
log p-value:-9.127e+00
Information Content per bp:1.913
Number of Target Sequences with motif2.0
Percentage of Target Sequences with motif0.29%
Number of Background Sequences with motif0.5
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets52.0 +/- 24.1bp
Average Position of motif in Background60.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)3.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

X-box(HTH)/NPC-H3K4me1-ChIP-Seq(GSE16256)/Homer

Match Rank:1
Score:0.60
Offset:-1
Orientation:reverse strand
Alignment:-TCCCATGCACACC
TTGCCATGGCAACC
 A C G T A C G T A G T C A G T C A G T C C G T A A C G T A C T G A G T C C G T A A G T C G T C A A G T C G T A C
A G C T G A C T C A T G A G T C G A T C G C T A C G A T C T A G T C A G G T A C C T G A T C G A G A T C G T A C

Rbpj1(?)/Panc1-Rbpj1-ChIP-Seq(GSE47459)/Homer

Match Rank:2
Score:0.59
Offset:-3
Orientation:forward strand
Alignment:---TCCCATGCACACC
HTTTCCCASG------
 A C G T A C G T A C G T A C G T A G T C A G T C A G T C C G T A A C G T A C T G A G T C C G T A A G T C G T C A A G T C G T A C
G A C T C A G T A G C T C G A T A G T C G A T C A G T C C G T A A T G C T C A G A C G T A C G T A C G T A C G T A C G T A C G T

PB0208.1_Zscan4_2/Jaspar

Match Rank:3
Score:0.59
Offset:2
Orientation:forward strand
Alignment:TCCCATGCACACC-----
--CGAAGCACACAAAATA
 A C G T A G T C A G T C A G T C C G T A A C G T A C T G A G T C C G T A A G T C G T C A A G T C G T A C A C G T A C G T A C G T A C G T A C G T
A C G T A C G T G T A C T A C G G C T A T C G A C T A G T G A C C G T A G T A C C T G A G A T C G C T A G T C A G T C A G C T A G C A T T C G A

Rfx1(HTH)/NPC-H3K4me1-ChIP-Seq(GSE16256)/Homer

Match Rank:4
Score:0.58
Offset:-1
Orientation:reverse strand
Alignment:-TCCCATGCACACC
TTGCCATGGCAACN
 A C G T A C G T A G T C A G T C A G T C C G T A A C G T A C T G A G T C C G T A A G T C G T C A A G T C G T A C
A G C T G A C T C A T G A G T C A G T C G C T A C G A T C T A G T C A G G T A C C T G A T C G A A G T C T G A C

PB0170.1_Sox17_2/Jaspar

Match Rank:5
Score:0.57
Offset:-2
Orientation:forward strand
Alignment:--TCCCATGCACACC--
GACCACATTCATACAAT
 A C G T A C G T A C G T A G T C A G T C A G T C C G T A A C G T A C T G A G T C C G T A A G T C G T C A A G T C G T A C A C G T A C G T
T A C G G C T A A G T C G T A C G T C A A G T C G C T A A G C T C G A T T G A C C T G A A G C T T C G A G A T C T C G A C G T A C G A T

AR-halfsite(NR)/LNCaP-AR-ChIP-Seq(GSE27824)/Homer

Match Rank:6
Score:0.57
Offset:2
Orientation:forward strand
Alignment:TCCCATGCACACC
--CCAGGAACAG-
 A C G T A G T C A G T C A G T C C G T A A C G T A C T G A G T C C G T A A G T C G T C A A G T C G T A C
A C G T A C G T T A G C G T A C C G T A C T A G A C T G T G C A C G T A A T G C C G T A A T C G A C G T

PB0044.1_Mtf1_1/Jaspar

Match Rank:7
Score:0.56
Offset:1
Orientation:reverse strand
Alignment:TCCCATGCACACC----
-NNTTTGCACACGGCCC
 A C G T A G T C A G T C A G T C C G T A A C G T A C T G A G T C C G T A A G T C G T C A A G T C G T A C A C G T A C G T A C G T A C G T
A C G T C G A T G A C T C A G T A C G T G A C T A C T G G A T C C T G A A G T C G C T A G A T C A C T G C T A G G A T C T A G C G T A C

HIC2/MA0738.1/Jaspar

Match Rank:8
Score:0.55
Offset:4
Orientation:forward strand
Alignment:TCCCATGCACACC
----ATGCCCACC
 A C G T A G T C A G T C A G T C C G T A A C G T A C T G A G T C C G T A A G T C G T C A A G T C G T A C
A C G T A C G T A C G T A C G T T C G A A G C T T C A G T G A C G T A C G T A C T C G A T A G C A G T C

Zfp809(Zf)/ES-Zfp809-ChIP-Seq(GSE70799)/Homer

Match Rank:9
Score:0.55
Offset:0
Orientation:reverse strand
Alignment:TCCCATGCACACC--
TCCCAGMCRAGCCCC
 A C G T A G T C A G T C A G T C C G T A A C G T A C T G A G T C C G T A A G T C G T C A A G T C G T A C A C G T A C G T
A G C T A G T C A G T C A G T C C T G A T C A G T G C A G A T C T C G A C G T A A C T G A T G C G T A C G T A C G A T C

NRF(NRF)/Promoter/Homer

Match Rank:10
Score:0.55
Offset:0
Orientation:reverse strand
Alignment:TCCCATGCACACC
GCGCATGCGCAC-
 A C G T A G T C A G T C A G T C C G T A A C G T A C T G A G T C C G T A A G T C G T C A A G T C G T A C
A C T G A G T C A C T G A G T C C G T A A C G T A C T G A G T C A C T G A G T C C T G A T A G C A C G T