Information for 20-GTTCCCTTGG (Motif 47)

A C T G A C G T A C G T A G T C A G T C A G T C A C G T A C G T A C T G A C T G
Reverse Opposite:
A G T C A G T C C G T A C G T A A C T G A C T G A C T G C G T A C G T A A G T C
p-value:1e-4
log p-value:-9.656e+00
Information Content per bp:1.530
Number of Target Sequences with motif3.0
Percentage of Target Sequences with motif0.44%
Number of Background Sequences with motif5.0
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets32.7 +/- 11.8bp
Average Position of motif in Background53.5 +/- 18.6bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

EBF1/MA0154.3/Jaspar

Match Rank:1
Score:0.71
Offset:0
Orientation:reverse strand
Alignment:GTTCCCTTGG----
ANTCCCTNGGGAAT
 A C T G A C G T A C G T A G T C A G T C A G T C A C G T A C G T A C T G A C T G A C G T A C G T A C G T A C G T
C T G A C A G T G A C T G T A C A G T C A G T C G C A T C G A T C T A G T C A G T A C G C T G A T G C A G A C T

Rfx1(HTH)/NPC-H3K4me1-ChIP-Seq(GSE16256)/Homer

Match Rank:2
Score:0.70
Offset:-1
Orientation:forward strand
Alignment:-GTTCCCTTGG---
NGTTGCCATGGCAA
 A C G T A C T G A C G T A C G T A G T C A G T C A G T C A C G T A C G T A C T G A C T G A C G T A C G T A C G T
A C T G T C A G A G C T G A C T C A T G A G T C A G T C G C T A C G A T C T A G T C A G G T A C C T G A T C G A

X-box(HTH)/NPC-H3K4me1-ChIP-Seq(GSE16256)/Homer

Match Rank:3
Score:0.69
Offset:-1
Orientation:forward strand
Alignment:-GTTCCCTTGG---
GGTTGCCATGGCAA
 A C G T A C T G A C G T A C G T A G T C A G T C A G T C A C G T A C G T A C T G A C T G A C G T A C G T A C G T
C A T G C T A G A G C T G A C T C A T G A G T C G A T C G C T A C G A T C T A G T C A G G T A C C T G A T C G A

EBF(EBF)/proBcell-EBF-ChIP-Seq(GSE21978)/Homer

Match Rank:4
Score:0.67
Offset:0
Orientation:forward strand
Alignment:GTTCCCTTGG--
NGTCCCNNGGGA
 A C T G A C G T A C G T A G T C A G T C A G T C A C G T A C G T A C T G A C T G A C G T A C G T
C T A G A T C G G A C T A G T C A G T C A G T C G A C T C T G A A C T G C T A G A C T G C T G A

Rfx1/MA0509.1/Jaspar

Match Rank:5
Score:0.67
Offset:0
Orientation:reverse strand
Alignment:GTTCCCTTGG----
GTTGCCATGGNAAC
 A C T G A C G T A C G T A G T C A G T C A G T C A C G T A C G T A C T G A C T G A C G T A C G T A C G T A C G T
A C T G A G C T G A C T C A T G A G T C A G T C C G T A C G A T C T A G T C A G T G A C C T G A T G C A G A T C

EBF1(EBF)/Near-E2A-ChIP-Seq(GSE21512)/Homer

Match Rank:6
Score:0.66
Offset:0
Orientation:forward strand
Alignment:GTTCCCTTGG--
GTCCCCAGGGGA
 A C T G A C G T A C G T A G T C A G T C A G T C A C G T A C G T A C T G A C T G A C G T A C G T
C A T G A C G T A G T C G A T C G A T C G A T C G C T A C T A G C T A G C T A G T C A G T C G A

Rfx2(HTH)/LoVo-RFX2-ChIP-Seq(GSE49402)/Homer

Match Rank:7
Score:0.65
Offset:0
Orientation:forward strand
Alignment:GTTCCCTTGG-----
GTTGCCATGGCAACM
 A C T G A C G T A C G T A G T C A G T C A G T C A C G T A C G T A C T G A C T G A C G T A C G T A C G T A C G T A C G T
C T A G A G C T G A C T C A T G A G T C A G T C G T C A C A G T C T A G T C A G G T A C C T G A T C G A G A T C T G A C

SF1(NR)/H295R-Nr5a1-ChIP-Seq(GSE44220)/Homer

Match Rank:8
Score:0.65
Offset:-1
Orientation:reverse strand
Alignment:-GTTCCCTTGG
BNTGDCCTTG-
 A C G T A C T G A C G T A C G T A G T C A G T C A G T C A C G T A C G T A C T G A C T G
A T G C C A T G A C G T C T A G C T G A T G A C T G A C G A C T G C A T A C T G A C G T

RFX(HTH)/K562-RFX3-ChIP-Seq(SRA012198)/Homer

Match Rank:9
Score:0.64
Offset:-2
Orientation:forward strand
Alignment:--GTTCCCTTGG----
CGGTTGCCATGGCAAC
 A C G T A C G T A C T G A C G T A C G T A G T C A G T C A G T C A C G T A C G T A C T G A C T G A C G T A C G T A C G T A C G T
A G T C A T C G C T A G A G C T G A C T C T A G A G T C A G T C G C T A C A G T T C A G T C A G G A T C C T G A T C G A G A T C

Nr5a2(NR)/Pancreas-LRH1-ChIP-Seq(GSE34295)/Homer

Match Rank:10
Score:0.64
Offset:1
Orientation:reverse strand
Alignment:GTTCCCTTGG-
-TGACCTTGAV
 A C T G A C G T A C G T A G T C A G T C A G T C A C G T A C G T A C T G A C T G A C G T
A C G T G C A T C T A G C T G A G A T C G T A C G A C T G A C T A T C G C T G A T G C A