Information for 14-AAAGCTTTAA (Motif 38)

T G C A C G T A C G T A A T C G G T A C A C G T C A G T A C G T C T G A T G C A
Reverse Opposite:
A C G T G A C T G T C A G T C A C G T A C A T G A T G C C G A T C G A T A C G T
p-value:1e-6
log p-value:-1.460e+01
Information Content per bp:1.769
Number of Target Sequences with motif19.0
Percentage of Target Sequences with motif2.77%
Number of Background Sequences with motif315.5
Percentage of Background Sequences with motif0.68%
Average Position of motif in Targets49.4 +/- 24.6bp
Average Position of motif in Background50.9 +/- 28.6bp
Strand Bias (log2 ratio + to - strand density)-0.6
Multiplicity (# of sites on avg that occur together)1.05
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Nr2e3/MA0164.1/Jaspar

Match Rank:1
Score:0.78
Offset:0
Orientation:forward strand
Alignment:AAAGCTTTAA
CAAGCTT---
 T G C A C G T A C G T A A T C G G T A C A C G T C A G T A C G T C T G A T G C A
G A T C C G T A C G T A A T C G A G T C A C G T A C G T A C G T A C G T A C G T

Tcf3(HMG)/mES-Tcf3-ChIP-Seq(GSE11724)/Homer

Match Rank:2
Score:0.60
Offset:3
Orientation:reverse strand
Alignment:AAAGCTTTAA---
---CCTTTGATGT
 T G C A C G T A C G T A A T C G G T A C A C G T C A G T A C G T C T G A T G C A A C G T A C G T A C G T
A C G T A C G T A C G T A T G C A G T C A C G T A C G T A C G T A T C G C G T A C G A T T A C G G A C T

Barx1(Homeobox)/Stomach-Barx1.3xFlag-ChIP-Seq(GSE69483)/Homer

Match Rank:3
Score:0.60
Offset:0
Orientation:forward strand
Alignment:AAAGCTTTAA
AAACMATTAN
 T G C A C G T A C G T A A T C G G T A C A C G T C A G T A C G T C T G A T G C A
T C G A C T G A C T G A A T G C G T A C G T C A A G C T A G C T C G T A T C A G

PH0158.1_Rhox11_2/Jaspar

Match Rank:4
Score:0.58
Offset:-2
Orientation:forward strand
Alignment:--AAAGCTTTAA-----
AGGACGCTGTAAAGGGA
 A C G T A C G T T G C A C G T A C G T A A T C G G T A C A C G T C A G T A C G T C T G A T G C A A C G T A C G T A C G T A C G T A C G T
C G T A T C A G C A T G G T C A G A T C C T A G T A G C C A G T C T A G G A C T G C T A C G T A G C T A C T A G T A C G T C A G G C T A

Arid3a/MA0151.1/Jaspar

Match Rank:5
Score:0.58
Offset:5
Orientation:reverse strand
Alignment:AAAGCTTTAA-
-----TTTAAT
 T G C A C G T A C G T A A T C G G T A C A C G T C A G T A C G T C T G A T G C A A C G T
A C G T A C G T A C G T A C G T A C G T G C A T A C G T A C G T C T G A C G T A A C G T

MSC/MA0665.1/Jaspar

Match Rank:6
Score:0.56
Offset:-1
Orientation:reverse strand
Alignment:-AAAGCTTTAA
AACAGCTGTT-
 A C G T T G C A C G T A C G T A A T C G G T A C A C G T C A G T A C G T C T G A T G C A
T C G A T C G A G T A C C G T A A T C G A T G C A C G T T A C G A C G T G A C T A C G T

Rhox11/MA0629.1/Jaspar

Match Rank:7
Score:0.56
Offset:-2
Orientation:forward strand
Alignment:--AAAGCTTTAA-----
AAGACGCTGTAAAGCGA
 A C G T A C G T T G C A C G T A C G T A A T C G G T A C A C G T C A G T A C G T C T G A T G C A A C G T A C G T A C G T A C G T A C G T
C G T A T G C A C A T G T G C A G A T C C T A G T A G C C A G T C T A G G A C T C G T A G C T A G C T A C T A G T A G C T C A G G C T A

PH0157.1_Rhox11_1/Jaspar

Match Rank:8
Score:0.56
Offset:-2
Orientation:forward strand
Alignment:--AAAGCTTTAA-----
AAGACGCTGTAAAGCGA
 A C G T A C G T T G C A C G T A C G T A A T C G G T A C A C G T C A G T A C G T C T G A T G C A A C G T A C G T A C G T A C G T A C G T
C G T A T G C A C A T G T G C A G A T C C T A G T A G C C A G T C T A G G A C T C G T A G C T A G C T A C T A G T A G C T C A G G C T A

Myf5(bHLH)/GM-Myf5-ChIP-Seq(GSE24852)/Homer

Match Rank:9
Score:0.56
Offset:-2
Orientation:forward strand
Alignment:--AAAGCTTTAA
BAACAGCTGT--
 A C G T A C G T T G C A C G T A C G T A A T C G G T A C A C G T C A G T A C G T C T G A T G C A
A C G T T C G A T C G A A G T C G T C A T A C G A T G C A C G T A C T G A G C T A C G T A C G T

Tcf21/MA0832.1/Jaspar

Match Rank:10
Score:0.56
Offset:-3
Orientation:forward strand
Alignment:---AAAGCTTTAA-
GCAACAGCTGTTGT
 A C G T A C G T A C G T T G C A C G T A C G T A A T C G G T A C A C G T C A G T A C G T C T G A T G C A A C G T
T C A G G A T C C T G A G T C A A G T C G T C A A C T G A G T C A C G T A C T G A C G T G A C T T C A G A G C T