Information for 10-RARGGCSCRGTSA (Motif 25)

T C A G C G T A C T A G C T A G C T A G G A T C A T G C A G T C C T G A A T C G A G C T T A G C G T C A
Reverse Opposite:
C A G T A T C G C T G A A T G C A G C T A C T G T A C G C T A G A G T C A G T C A G T C A C G T A G C T
p-value:1e-8
log p-value:-2.004e+01
Information Content per bp:1.797
Number of Target Sequences with motif4.0
Percentage of Target Sequences with motif0.58%
Number of Background Sequences with motif1.6
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets52.8 +/- 21.9bp
Average Position of motif in Background27.9 +/- 9.8bp
Strand Bias (log2 ratio + to - strand density)1.6
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

POL006.1_BREu/Jaspar

Match Rank:1
Score:0.64
Offset:3
Orientation:reverse strand
Alignment:RARGGCSCRGTSA
---GGCGCGCT--
 T C A G C G T A C T A G C T A G C T A G G A T C A T G C A G T C C T G A A T C G A G C T T A G C G T C A
A C G T A C G T A C G T C T A G T A C G A G T C A C T G A G T C A T C G A T G C A C G T A C G T A C G T

PB0039.1_Klf7_1/Jaspar

Match Rank:2
Score:0.60
Offset:-2
Orientation:reverse strand
Alignment:--RARGGCSCRGTSA-
NNAGGGGCGGGGTNNA
 A C G T A C G T T C A G C G T A C T A G C T A G C T A G G A T C A T G C A G T C C T G A A T C G A G C T T A G C G T C A A C G T
G C T A C G A T C T G A C T A G C T A G A C T G A C T G G A T C C A T G A C T G C A T G C A T G A G C T G A T C T C A G C G T A

Klf12/MA0742.1/Jaspar

Match Rank:3
Score:0.59
Offset:-3
Orientation:reverse strand
Alignment:---RARGGCSCRGTSA
NANAAGGGCGTGGTC-
 A C G T A C G T A C G T T C A G C G T A C T A G C T A G C T A G G A T C A T G C A G T C C T G A A T C G A G C T T A G C G T C A
C G T A C G T A C G A T C G T A C G T A C T A G T C A G C T A G G A T C C A T G A C G T A T C G C A T G A G C T G T A C A C G T

ZNF416(Zf)/HEK293-ZNF416.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:4
Score:0.59
Offset:3
Orientation:reverse strand
Alignment:RARGGCSCRGTSA
---TGCCCAGNHW
 T C A G C G T A C T A G C T A G C T A G G A T C A T G C A G T C C T G A A T C G A G C T T A G C G T C A
A C G T A C G T A C G T C G A T C A T G A G T C G A T C G T A C G C T A C T A G C A T G G A T C C G T A

ZNF711(Zf)/SHSY5Y-ZNF711-ChIP-Seq(GSE20673)/Homer

Match Rank:5
Score:0.58
Offset:2
Orientation:forward strand
Alignment:RARGGCSCRGTSA
--AGGCCTAG---
 T C A G C G T A C T A G C T A G C T A G G A T C A T G C A G T C C T G A A T C G A G C T T A G C G T C A
A C G T A C G T T G C A A C T G T A C G A T G C A G T C G A C T T C G A A T C G A C G T A C G T A C G T

PB0009.1_E2F3_1/Jaspar

Match Rank:6
Score:0.57
Offset:-2
Orientation:forward strand
Alignment:--RARGGCSCRGTSA
ATAAGGGCGCGCGAT
 A C G T A C G T T C A G C G T A C T A G C T A G C T A G G A T C A T G C A G T C C T G A A T C G A G C T T A G C G T C A
T C G A G C A T C G T A G C T A C T A G T A C G T A C G T A G C A T C G A T G C A T C G G A T C A T C G G C T A G C A T

KLF3(Zf)/MEF-Klf3-ChIP-Seq(GSE44748)/Homer

Match Rank:7
Score:0.57
Offset:-2
Orientation:reverse strand
Alignment:--RARGGCSCRGTSA
NNVDGGGYGGGGCYN
 A C G T A C G T T C A G C G T A C T A G C T A G C T A G G A T C A T G C A G T C C T G A A T C G A G C T T A G C G T C A
T A C G T G A C T C A G C T G A A C T G A C T G A C T G A G C T A C T G A C T G C T A G A C T G A G T C A G T C C T G A

PB0008.1_E2F2_1/Jaspar

Match Rank:8
Score:0.55
Offset:-2
Orientation:forward strand
Alignment:--RARGGCSCRGTSA
ATAAAGGCGCGCGAT
 A C G T A C G T T C A G C G T A C T A G C T A G C T A G G A T C A T G C A G T C C T G A A T C G A G C T T A G C G T C A
C T G A G C A T C G T A G C T A C T G A T A C G A T C G T G A C A T C G A T G C A T C G G A T C T A C G G C T A G C A T

PH0141.1_Pknox2/Jaspar

Match Rank:9
Score:0.55
Offset:1
Orientation:forward strand
Alignment:RARGGCSCRGTSA----
-AAGCACCTGTCAATAT
 T C A G C G T A C T A G C T A G C T A G G A T C A T G C A G T C C T G A A T C G A G C T T A G C G T C A A C G T A C G T A C G T A C G T
A C G T G C T A C T G A T C A G A T G C T C G A T A G C G T A C A G C T A C T G G A C T A G T C C T G A G T C A G C A T G C T A A G C T

ZNF165(Zf)/WHIM12-ZNF165-ChIP-Seq(GSE65937)/Homer

Match Rank:10
Score:0.54
Offset:-2
Orientation:forward strand
Alignment:--RARGGCSCRGTSA
AAGGKGRCGCAGGCA
 A C G T A C G T T C A G C G T A C T A G C T A G C T A G G A T C A T G C A G T C C T G A A T C G A G C T T A G C G T C A
T G C A C G T A A C T G T C A G C A G T C A T G T C A G G A T C T A C G A G T C T G C A A C T G A C T G T G A C G T C A